RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 LGI3Q8N145 548 aa14.56□□□□□ -0.08
RPAIN-208ENST00000571043 OR10J5Q8NHC4 309 aa14.56□□□□□ -0.08
RPAIN-208ENST00000571043 KIRREL1Q96J84 757 aa14.56□□□□□ -0.08
RPAIN-208ENST00000571043 SLC5A7Q9GZV3 580 aa14.56□□□□□ -0.08
RPAIN-208ENST00000571043 MBD2Q9UBB5 411 aa14.56□□□□□ -0.08
RPAIN-208ENST00000571043 GCN1Q92616 2671 aaKnown RBP14.55□□□□□ -0.08
RPAIN-208ENST00000571043 MPTX1A8MV57 137 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 PET100P0DJ07 73 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 SRPXP78539 464 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 HMGN3Q15651 99 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 GGNBP1Q5YKI7 109 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 SLC35E4Q6ICL7 350 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 VHLLQ6RSH7 139 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 INO80EQ8NBZ0 244 aaPredicted RBP14.55□□□□□ -0.08
RPAIN-208ENST00000571043 OR11L1Q8NGX0 322 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 LILRB1Q8NHL6 650 aaPredicted RBP14.55□□□□□ -0.08
RPAIN-208ENST00000571043 LRRC29Q8WV35 223 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 MSI2Q96DH6 328 aaKnown RBP14.55□□□□□ -0.08
RPAIN-208ENST00000571043 MEGF10Q96KG7 1140 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 RNF126Q9BV68 326 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 OR2W1Q9Y3N9 320 aa14.55□□□□□ -0.08
RPAIN-208ENST00000571043 C3orf85A0A1B0GTC6 90 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 RNF222A6NCQ9 220 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 SRRM5B3KS81 715 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 PSPNO60542 156 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 B3GALNT1O75752 331 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 ATXN7L3Q14CW9 347 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-208ENST00000571043 IAH1Q2TAA2 248 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-208ENST00000571043 PRSS54Q6PEW0 395 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 GLYATL2Q8WU03 294 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 FAM222BQ8WU58 562 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 SECTM1Q8WVN6 248 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 MRPL24Q96A35 216 aaKnown RBP14.54□□□□□ -0.08
RPAIN-208ENST00000571043 C18orf12Q96KH6 178 aa14.54□□□□□ -0.08
RPAIN-208ENST00000571043 MRPL37Q9BZE1 423 aaKnown RBP14.54□□□□□ -0.08
RPAIN-208ENST00000571043 FBXO9Q9UK97 447 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-208ENST00000571043 IGKV1D-13A0A0B4J2D9 117 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 CLDN1O95832 211 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 IGKV1-13P0DP09 117 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 GATA4P43694 442 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 CEBPDP49716 269 aaPredicted RBP14.53□□□□□ -0.08
RPAIN-208ENST00000571043 PAX5Q02548 391 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 SP6Q3SY56 376 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 CLLU1Q5K131 121 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 NCMAPQ5T1S8 102 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 CMTM1Q8IZ96 169 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 OR8H3Q8N146 312 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 OR2V2Q96R30 315 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 ESRP2Q9H6T0 727 aaKnown RBP14.53□□□□□ -0.08
RPAIN-208ENST00000571043 KCNIP1Q9NZI2 227 aa14.53□□□□□ -0.08
RPAIN-208ENST00000571043 KANTRA0A1W2PQU2 76 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 H0YIZ8 118 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.52□□□□□ -0.08
RPAIN-208ENST00000571043 PHF1O43189 567 aaPredicted RBP14.52□□□□□ -0.08
RPAIN-208ENST00000571043 BCL2L11O43521 198 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 S100GP29377 79 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 AP2S1P53680 142 aaPredicted RBP14.52□□□□□ -0.08
RPAIN-208ENST00000571043 BSPH1Q075Z2 132 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 ESCO2Q56NI9 601 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 BEX5Q5H9J7 111 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 ZNF818PQ6ZRF7 136 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 TBC1D26Q86UD7 250 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 DCUN1D4Q92564 292 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 SPOCK3Q9BQ16 436 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 DNAJB11Q9UBS4 358 aa14.52□□□□□ -0.08
RPAIN-208ENST00000571043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.51□□□□□ -0.09
RPAIN-208ENST00000571043 LINC00862A6NCI5 91 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 SIAH2O43255 324 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 SPRY3O43610 288 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 WNT2P09544 360 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 OR3A1P47881 315 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 RAB14P61106 215 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 UBA52P62987 128 aaKnown RBP14.51□□□□□ -0.09
RPAIN-208ENST00000571043 COL10A1Q03692 680 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 RAB32Q13637 225 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 MEX3BQ6ZN04 569 aaKnown RBP14.51□□□□□ -0.09
RPAIN-208ENST00000571043 BVESQ8NE79 360 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 PLPPR2Q96GM1 343 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TMEM56Q96MV1 263 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TP53RKQ96S44 253 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 GSX2Q9BZM3 304 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TMEM222Q9H0R3 208 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TAF9BQ9HBM6 251 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 CCL28Q9NRJ3 127 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 GSKIPQ9P0R6 139 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 ZDHHC8Q9ULC8 765 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TMED3Q9Y3Q3 217 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TMEM56-RWDD3S4R434 201 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 RPS10-NUDT3A0A1W2PQS6 291 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 OOEPA6NGQ2 149 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 DEFB108AA8MXU0 73 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 ABCD4O14678 606 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 HEXAP06865 529 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 TNFSF4P23510 183 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 PRDX2P32119 198 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 OR10V1Q8NGI7 309 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 SCARB1Q8WTV0 552 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 IL1F10Q8WWZ1 152 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 ERGIC1Q969X5 290 aa14.51□□□□□ -0.09
RPAIN-208ENST00000571043 OR1A1Q9P1Q5 309 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms