RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ABCA7Q8IZY2 2146 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 A0A1B0GUS0 222 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 PROB1E7EW31 1015 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 IFNL4K9M1U5 179 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 DEFA4P12838 97 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 KIR2DL1P43626 348 aaPredicted RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 HEYLQ9NQ87 328 aaPredicted RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 LOC102725191A0A1B0GVB3 256 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 ZNF732B4DXR9 585 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 SCRG1O75711 98 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 EFEMP2O95967 443 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 CD82P27701 267 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 NPBWR2P48146 333 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 ERVFC1-1P60608 527 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 QRFPP83859 136 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 MSMO1Q15800 293 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 GAB4Q2WGN9 574 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 KIAA1644Q3SXP7 199 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 KIAA0895LQ68EN5 471 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 PHOSPHO2Q8TCD6 241 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 OR4C12Q96R67 309 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 RAB40CQ96S21 281 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 IMMP2LQ96T52 175 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 C19orf25Q9UFG5 118 aaPredicted RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 RARRES3Q9UL19 164 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 POLEQ07864 2286 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 A0A1W2PQF6 199 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 C5orf49A4QMS7 147 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 TSPAN2O60636 221 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 PMELP40967 661 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 EIF3IQ13347 325 aaKnown RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 CEACAM16Q2WEN9 425 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 ZNF818PQ6ZRF7 136 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 PINX1Q96BK5 328 aaKnown RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 NEIL1Q96FI4 390 aaPredicted RBP9.44□□□□□ -0.9
PALB2-206ENST00000568219 ZNF488Q96MN9 340 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 SNHG12Q9BXW3 62 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 PARLQ9H300 379 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 CDH23Q9H251 3354 aa9.44□□□□□ -0.9
PALB2-206ENST00000568219 DEGS1O15121 323 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 LINC01565O15544 149 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 NDUFB4O95168 129 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 MPZP25189 248 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 IER3P46695 156 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 HINT1P49773 126 aaPredicted RBP9.43□□□□□ -0.9
PALB2-206ENST00000568219 TNFSF10P50591 281 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 UCP3P55916 312 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 SLC22A18ASQ8N1D0 253 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 CLCF1Q9UBD9 225 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 A0A087WWC5 75 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 HRASP01112 189 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 GABRG2P18507 467 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 FUT6P51993 359 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 PHYHD1Q5SRE7 291 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 SPATA46Q5T0L3 261 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 Q6ZS52 159 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 OR5AU1Q8NGC0 362 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 OR1F12Q8NHA8 337 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 MVB12AQ96EY5 273 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 UHRF2Q96PU4 802 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 SDF2L1Q9HCN8 221 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 PTRH2Q9Y3E5 179 aaKnown RBP9.43□□□□□ -0.9
PALB2-206ENST00000568219 HS3ST3A1Q9Y663 406 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 A0A1B0GU03 582 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 CXCL13O43927 109 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 IGHV3-13P01766 116 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 IGHV3-7P01780 117 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 ZNF17P17021 662 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 TCF23Q7RTU1 214 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 OR6X1Q8NH79 312 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 STARD4Q96DR4 205 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 Q96M66 194 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
PALB2-206ENST00000568219 PGPEP1LA6NFU8 196 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 ANKRD30BLA7E2S9 258 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 COX5BP10606 129 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 MPLP40238 635 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 NUBP1P53384 320 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 SELENOHQ8IZQ5 122 aaKnown RBP9.42□□□□□ -0.9
PALB2-206ENST00000568219 MTCH1Q9NZJ7 389 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 AQP7P3A6NL99 342 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 ACTL6BO94805 426 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 NPSP0C0P6 89 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.42□□□□□ -0.9
PALB2-206ENST00000568219 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 MOB3AQ96BX8 217 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 GPR146Q96CH1 333 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 MANBALQ9NQG1 85 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 GRPP07492 148 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 COL5A1-AS1Q5SY13 56 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 SPSB3Q6PJ21 355 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms