RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RCC2Q9P258 522 aaKnown RBP3.82□□□□□ -1.8
CLK3-219ENST00000567805 GHRLQ9UBU3 117 aa3.82□□□□□ -1.8
CLK3-219ENST00000567805 PSG11Q9UQ72 335 aa3.82□□□□□ -1.8
CLK3-219ENST00000567805 MRPS28Q9Y2Q9 187 aaKnown RBP3.82□□□□□ -1.8
CLK3-219ENST00000567805 MOB4Q9Y3A3 225 aa3.82□□□□□ -1.8
CLK3-219ENST00000567805 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 TRAV39A0A0B4J263 110 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 ADARB2-AS1A8MUL3 147 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 ANKRD65E5RJM6 399 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 PTGES3LE9PB15 166 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 C15orf65H3BRN8 121 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 AIPO00170 330 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 SDCBPO00560 298 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 HSD17B6O14756 317 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 PIN1P1O15428 100 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 SPINT2O43291 252 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 FGF16O43320 207 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 CA11O75493 328 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 SC5DO75845 299 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 IGHV3-7P01780 117 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 MT-ND4P03905 459 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 GAPDHP04406 335 aaKnown RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 GLAP06280 429 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LPLP06858 475 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 SNRNP70P08621 437 aaKnown RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 UBBP0CG47 229 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 MGMTP16455 207 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 TMEM11P17152 192 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 IL3RAP26951 378 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LOXL3P58215 753 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 CD83Q01151 205 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 GABPB1Q06547 395 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 ZNF816Q0VGE8 651 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 GPR50Q13585 617 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 HES1Q14469 280 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 SPHARQ15513 63 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 ACSM3Q53FZ2 586 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 FBLN7Q53RD9 439 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 C6orf141Q5SZD1 244 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 C6orf183Q5T699 404 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 KPRPQ5T749 579 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 SYT6Q5T7P8 510 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 HIST2H2BDQ6DRA6 164 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 RAB12Q6IQ22 244 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 TRAT1Q6PIZ9 186 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 UNQ9370/PRO34162Q6UXP9 181 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 ZNF554Q86TJ5 538 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LYPD6Q86Y78 171 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 C1QL4Q86Z23 238 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 GAPTQ8N292 157 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LILRB2Q8N423 598 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LINC00311Q8N616 119 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 DRAM1Q8N682 238 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 C8orf31Q8N9H6 132 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 OR4X2Q8NGF9 303 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 CCDC107Q8WV48 283 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 PHYHIPQ92561 330 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 MYDGFQ969H8 173 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 ARL11Q969Q4 196 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 R3HDM4Q96D70 268 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 Q96M66 194 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 SELENOIQ9C0D9 397 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 CST11Q9H112 138 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 GFOD1Q9NXC2 390 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 SCN3BQ9NY72 215 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 ETAA1Q9NY74 926 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 NKX1-2Q9UD57 310 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 TRAPPC2LQ9UL33 140 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 LSM2Q9Y333 95 aaKnown RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 TSSC4Q9Y5U2 329 aaPredicted RBP3.81□□□□□ -1.8
CLK3-219ENST00000567805 PEX16Q9Y5Y5 336 aa3.81□□□□□ -1.8
CLK3-219ENST00000567805 IGHV1-3A0A0C4DH29 117 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 A0A1W2PPE3 182 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TCRBV4S1A1TA0A5B7 111 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 C12orf77C9JDV5 145 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 G3V4G9 280 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 H0YHG0 523 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 CCRL2O00421 344 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TXNL1O43396 289 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 PDCD6O75340 191 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 IGKV1D-33P01593 117 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 IGKV1-33P01594 117 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 HBZP02008 142 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 PF4V1P10720 104 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 FUT3P21217 361 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 MYF6P23409 242 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 ZNF137PP52743 207 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 AQP4P55087 323 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 GP2P55259 537 aaKnown RBP3.8□□□□□ -1.8
CLK3-219ENST00000567805 SLC35A2P78381 396 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 EBI3Q14213 229 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 DIAPH2-AS1Q14236 149 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 MED22Q15528 200 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TRAM1Q15629 374 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 BEAN1Q3B7T3 259 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TCTEX1D4Q5JR98 221 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 C9orf152Q5JTZ5 239 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 RBM48Q5RL73 367 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms