RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MRPL24Q96A35 216 aaKnown RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ELMOD3Q96FG2 381 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF486Q96H40 463 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 MED30Q96HR3 178 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 OR2V2Q96R30 315 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ALX4Q9H161 411 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF286AQ9HBT8 521 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 C12orf4Q9NQ89 552 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 C1orf123Q9NWV4 160 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 TREM2Q9NZC2 230 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4Q9UBX2 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 OR14J1Q9UGF5 321 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 RALYQ9UKM9 306 aaKnown RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 POLDIP2Q9Y2S7 368 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 NOP16Q9Y3C1 178 aaKnown RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 SPTA1P02549 2419 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 USP24Q9UPU5 2620 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 ARID1AO14497 2285 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 ABCA4P78363 2273 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TRAV14DV4A0A0A6YYC5 116 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 IGKV1D-13A0A0B4J2D9 117 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 hCG_1807616A0A1W2PRN6 198 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 MEX3AA1L020 520 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 PRSS29PA6NIE9 313 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 MPTX1A8MV57 137 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 VSTM5A8MXK1 200 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 MCRIP1C9JLW8 97 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 DEGS1O15121 323 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 HLA-AP01891 365 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 OR5H8P0DN80 308 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 IGKV1-13P0DP09 117 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 ANXA3P12429 323 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 SELLP14151 372 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 AKR1C4P17516 323 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 AADACP22760 399 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TUBG1P23258 451 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 GCSHP23434 173 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 NFYAP23511 347 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 PTAFRP25105 342 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 CHRNB4P30926 498 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 FCGR2CP31995 323 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 OR3A1P47881 315 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 OR3A3P47888 321 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 FXYD4P59646 89 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TSPAN5P62079 268 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 HLA-DRB3P79483 266 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TFF3Q07654 80 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 SLC9A3R2Q15599 337 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 GRK1Q15835 563 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 ANKRD55Q3KP44 614 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 FBXL19-AS1Q494R0 122 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 PAN3Q58A45 887 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 NCMAPQ5T1S8 102 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM108Q6UXF1 575 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 UNQ6126/PRO20091Q6UXV3 157 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 Q6ZS49 121 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 MOGAT3Q86VF5 341 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A1Q86YD7 464 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 GAPTQ8N292 157 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 C9orf62Q8N4C0 152 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 C12orf45Q8N5I9 185 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 CD177Q8N6Q3 437 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TPRX1Q8N7U7 411 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 BOLLQ8N9W6 283 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 UXS1Q8NBZ7 420 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM185AQ8NFB2 350 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 OR5T2Q8NGG2 359 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 OR11L1Q8NGX0 322 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 LILRB1Q8NHL6 650 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 NEK7Q8TDX7 302 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 CASTOR1Q8WTX7 329 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 COQ2Q96H96 371 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 PARP12Q9H0J9 701 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 PLK3Q9H4B4 646 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM165Q9HC07 324 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 GPN1Q9HCN4 374 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 CHMP1AQ9HD42 196 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TUBG2Q9NRH3 451 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 PCDHB16Q9NRJ7 776 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 DECR2Q9NUI1 292 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 NECAP2Q9NVZ3 263 aa4.78□□□□□ -1.64
SF3B3-210ENST00000567654 TPRP12270 2363 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 SPTBN1Q01082 2364 aaKnown RBP4.78□□□□□ -1.64
SF3B3-210ENST00000567654 IGKV1D-17A0A075B6S4 117 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 FAM172BPA6NC97 362 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 RFPL4AA6NLU0 287 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF785A8K8V0 405 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SRRM5B3KS81 715 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 TRDCB7Z8K6 153 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 RFPL4AL1F8VTS6 287 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 FCN3O75636 299 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 ADAP1O75689 374 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SLC22A5O76082 557 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OR2A4O95047 310 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SFT2D2O95562 160 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 CYB5R3P00387 301 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms