RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	IGHV3-7	P01780	117 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	MAS1	P04201	325 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	CD28	P10747	220 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	FUT3	P21217	361 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	VDAC2	P45880	294 aa	Predicted RBP	5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	EIF2B2	P49770	351 aa	Known RBP	5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	MADCAM1	Q13477	382 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	GPR50	Q13585	617 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	SPHAR	Q15513	63 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	ACSM3	Q53FZ2	586 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	SMUG1	Q53HV7	270 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	HIST2H2BD	Q6DRA6	164 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	ZNF497	Q6ZNH5	498 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	PRSS48	Q7RTY5	328 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	CENPV	Q7Z7K6	275 aa	Predicted RBP	5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	MS4A15	Q8N5U1	240 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	OR5AU1	Q8NGC0	362 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	NEK7	Q8TDX7	302 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	CCDC107	Q8WV48	283 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	SGCD	Q92629	289 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	TOMM40L	Q969M1	308 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	ARL11	Q969Q4	196 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	OCSTAMP	Q9BR26	566 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	UQCC2	Q9BRT2	126 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	SLC25A33	Q9BSK2	321 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	MND1	Q9BWT6	205 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	SELENOI	Q9C0D9	397 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	RBM38	Q9H0Z9	239 aa	Known RBP	5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	BANF2	Q9H503	90 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	SPACA1	Q9HBV2	294 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	RSL24D1	Q9UHA3	163 aa	Known RBP	5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	PEX16	Q9Y5Y5	336 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	CEPT1	Q9Y6K0	416 aa		5.53	□□□□□ -1.52
SF3B3-209	ENST00000567635	FAM90A10P	A6NDY2	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A18P	A6NE21	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A16P	A6NEW6	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A20P	A6NIJ5	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A7P	A6NKC0	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A9P	A6NNJ1	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A12P	A8MX19	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A5P	A8MXJ8	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A23P	A8MXZ1	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	C15orf65	H3BRN8	121 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	AIP	O00170	330 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SDCBP	O00560	298 aa	Predicted RBP	5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SPINT2	O43291	252 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	CRTAP	O75718	401 aa	Predicted RBP	5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	OPN1MW	P04001	364 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	GAPDH	P04406	335 aa	Known RBP	5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	GLA	P06280	429 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	LPL	P06858	475 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A15P	P0C7V4	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A13P	P0C7W8	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A14P	P0C7W9	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	FAM90A24P	P0C7X0	464 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	OPN1MW2	P0DN77	364 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	OPN1MW3	P0DN78	364 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	MGMT	P16455	207 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SRM	P19623	302 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SSTR5	P35346	364 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	GNG10	P50151	68 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	RAB7A	P51149	207 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SPCS2	Q15005	226 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	NSUN5P1	Q3KNT7	163 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	ABCA11P	Q4W5N1	156 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SYT6	Q5T7P8	510 aa	Predicted RBP	5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	AWAT2	Q6E213	333 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	RAB12	Q6IQ22	244 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	GPR141	Q7Z602	305 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	CEACAM19	Q7Z692	300 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	NDUFA11	Q86Y39	141 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	LYPD6	Q86Y78	171 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR8H3	Q8N146	312 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	LYG1	Q8N1E2	194 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	SVOP	Q8N4V2	548 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	DRAM1	Q8N682	238 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	NKAIN3	Q8N8D7	197 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	C8orf31	Q8N9H6	132 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR52M1	Q8NGK5	317 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	OR10X1	Q8NGY0	326 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	WIPF2	Q8TF74	440 aa	Predicted RBP	5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	TMED9	Q9BVK6	235 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	CCDC90B	Q9GZT6	254 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	RAB9B	Q9NP90	201 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	GHRL	Q9UBU3	117 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635	TRAPPC2L	Q9UL33	140 aa		5.52	□□□□□ -1.53
SF3B3-209	ENST00000567635		A0A1W2PPE3	182 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635		A0A1W2PPI3	338 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	UBE2QL1	A1L167	161 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	ZNF701	M0R085	212 aa	Predicted RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	CCRL2	O00421	344 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	CA11	O75493	328 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	AMY1A	P04745	511 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	AMY2A	P04746	511 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	SNRNP70	P08621	437 aa	Known RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	UBB	P0CG47	229 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	GP2	P55259	537 aa	Known RBP	5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	LOXL3	P58215	753 aa		5.51	□□□□□ -1.53
SF3B3-209	ENST00000567635	CD83	Q01151	205 aa		5.51	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms