RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 A0A1W2PPE2 198 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 A0A1W2PR64 198 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 A0A1W2PRV1 198 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 F8VVB4 439 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 F8VWA3 439 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 DEGS1O15121 323 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 IGHV1-69P01742 117 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 TFF1P04155 84 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 TK1P04183 234 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 PRTN3P24158 256 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
CLK3-218ENST00000566926 UBA52P62987 128 aaKnown RBP11.03□□□□□ -0.64
CLK3-218ENST00000566926 MEF2DQ14814 521 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 OXA1LQ15070 435 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 SRSF7Q16629 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLK3-218ENST00000566926 SIGIRRQ6IA17 410 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 C6orf201Q7Z4U5 140 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 ZDHHC22Q8N966 263 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 TMEM229BQ8NBD8 167 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 METTL8Q9H825 291 aaKnown RBP11.03□□□□□ -0.64
CLK3-218ENST00000566926 C12orf4Q9NQ89 552 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 ANAPC10Q9UM13 185 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 KCNK7Q9Y2U2 307 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 STAB1Q9NY15 2570 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 MEIOCA2RUB1 952 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.65
CLK3-218ENST00000566926 CLDN34H7C241 214 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 K7N7A8 449 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 LANCL1O43813 399 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 AKAIN1P0CW23 69 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 LMO1P25800 156 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 TAS2R46P59540 309 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 OLFML2AQ68BL7 652 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 NCR3LG1Q68D85 454 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 FAM185AQ8N0U4 392 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
CLK3-218ENST00000566926 ASCC1Q8N9N2 400 aaKnown RBP11.02□□□□□ -0.65
CLK3-218ENST00000566926 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 SNX22Q96L94 193 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 ZNF48Q96MX3 618 aaPredicted RBP11.02□□□□□ -0.65
CLK3-218ENST00000566926 CMSS1Q9BQ75 279 aaKnown RBP11.02□□□□□ -0.65
CLK3-218ENST00000566926 PRDM13Q9H4Q3 707 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 UNKLQ9H9P5 680 aaKnown RBP11.02□□□□□ -0.65
CLK3-218ENST00000566926 ESM1Q9NQ30 184 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 KLK11Q9UBX7 282 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 MGAT4AQ9UM21 535 aa11.02□□□□□ -0.65
CLK3-218ENST00000566926 DNAJC9-AS1A6NH13 148 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 PLA2G10O15496 165 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 HAND1O96004 215 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 ZNF44P15621 663 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 NAT1P18440 290 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
CLK3-218ENST00000566926 PAX5Q02548 391 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 COL10A1Q03692 680 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
CLK3-218ENST00000566926 Q6ZS49 121 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 GDPD3Q7L5L3 318 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 NUDCD2Q8WVJ2 157 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 GCDHQ92947 438 aaPredicted RBP11.01□□□□□ -0.65
CLK3-218ENST00000566926 SULT4A1Q9BR01 284 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 DPCDQ9BVM2 203 aaPredicted RBP11.01□□□□□ -0.65
CLK3-218ENST00000566926 C11orf54Q9H0W9 315 aaPredicted RBP11.01□□□□□ -0.65
CLK3-218ENST00000566926 SIRT7Q9NRC8 400 aa11.01□□□□□ -0.65
CLK3-218ENST00000566926 TRBV6-6A0A0A6YYG2 114 aa11□□□□□ -0.65
CLK3-218ENST00000566926 FAM240BA0A1B0GVZ2 78 aa11□□□□□ -0.65
CLK3-218ENST00000566926 TMEM89A2RUT3 159 aa11□□□□□ -0.65
CLK3-218ENST00000566926 SSX5O60225 188 aa11□□□□□ -0.65
CLK3-218ENST00000566926 OR2H2O95918 312 aa11□□□□□ -0.65
CLK3-218ENST00000566926 CD74P04233 296 aa11□□□□□ -0.65
CLK3-218ENST00000566926 PTHLHP12272 177 aa11□□□□□ -0.65
CLK3-218ENST00000566926 PAN3Q58A45 887 aaKnown RBP11□□□□□ -0.65
CLK3-218ENST00000566926 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
CLK3-218ENST00000566926 STEAP1BQ6NZ63 245 aa11□□□□□ -0.65
CLK3-218ENST00000566926 Q6P435 159 aa11□□□□□ -0.65
CLK3-218ENST00000566926 C12orf54Q6X4T0 127 aa11□□□□□ -0.65
CLK3-218ENST00000566926 MOB1BQ7L9L4 216 aa11□□□□□ -0.65
CLK3-218ENST00000566926 HOGA1Q86XE5 327 aa11□□□□□ -0.65
CLK3-218ENST00000566926 CENPSQ8N2Z9 138 aa11□□□□□ -0.65
CLK3-218ENST00000566926 TMEM86BQ8N661 226 aa11□□□□□ -0.65
CLK3-218ENST00000566926 Q8N7P7 452 aa11□□□□□ -0.65
CLK3-218ENST00000566926 SUMF2Q8NBJ7 301 aa11□□□□□ -0.65
CLK3-218ENST00000566926 DUSP18Q8NEJ0 188 aa11□□□□□ -0.65
CLK3-218ENST00000566926 NEK7Q8TDX7 302 aa11□□□□□ -0.65
CLK3-218ENST00000566926 FAAP24Q9BTP7 215 aa11□□□□□ -0.65
CLK3-218ENST00000566926 DPAGT1Q9H3H5 408 aa11□□□□□ -0.65
CLK3-218ENST00000566926 AK3Q9UIJ7 227 aa11□□□□□ -0.65
CLK3-218ENST00000566926 FAM96BQ9Y3D0 163 aa11□□□□□ -0.65
CLK3-218ENST00000566926 TRAV24A0A0B4J272 114 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 SLC33A1O00400 549 aaPredicted RBP10.99□□□□□ -0.65
CLK3-218ENST00000566926 ZNF737O75373 536 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 CSN2P05814 226 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
CLK3-218ENST00000566926 SLC6A1P30531 599 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 KIR2DS4P43632 304 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms