RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 RAP2AP10114 183 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 TPPP2P59282 170 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 PMS2P11Q13670 270 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 NXNL2Q5VZ03 156 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 FAM220AQ7Z4H9 259 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 BCDIN3DQ7Z5W3 292 aaKnown RBP12.78□□□□□ -0.36
CDH3-205ENST00000566808 TMEM179BQ7Z7N9 219 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 DEFB107AQ8IZN7 70 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 ZNF439Q8NDP4 499 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 NDE1Q9NXR1 346 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 PKHD1P08F94 4074 aa12.78□□□□□ -0.36
CDH3-205ENST00000566808 MUC4Q99102 2169 aa12.77□□□□□ -0.36
CDH3-205ENST00000566808 A0A1W2PQL4 384 aaPredicted RBP12.77□□□□□ -0.37
CDH3-205ENST00000566808 TMEM30CPA0ZSE6 113 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 TPPPO94811 219 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 CNIH1O95406 144 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 ISG15P05161 165 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 ANXA8P13928 327 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 LRRC36Q1X8D7 754 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 TMEM30BQ3MIR4 351 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 AADACL4Q5VUY2 407 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 LIN54Q6MZP7 749 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 GID4Q8IVV7 300 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 UBALD1Q8TB05 177 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 RHOVQ96L33 236 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 ELAC2Q9BQ52 826 aaKnown RBP12.77□□□□□ -0.37
CDH3-205ENST00000566808 DPCDQ9BVM2 203 aaPredicted RBP12.77□□□□□ -0.37
CDH3-205ENST00000566808 SLA2Q9H6Q3 261 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 H2AFY2Q9P0M6 372 aaPredicted RBP12.77□□□□□ -0.37
CDH3-205ENST00000566808 DHDHQ9UQ10 334 aa12.77□□□□□ -0.37
CDH3-205ENST00000566808 ORC5O43913 435 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 OR2T7P0C7T2 308 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 CD81P60033 236 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 KISS1Q15726 138 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
CDH3-205ENST00000566808 CD200R1LQ6Q8B3 271 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 DHFR2Q86XF0 187 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 HS3ST5Q8IZT8 346 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 DNAJC9Q8WXX5 260 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
CDH3-205ENST00000566808 FAM53CQ9NYF3 392 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 GNG12Q9UBI6 72 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 RNF150Q9ULK6 438 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 A3GALT2U3KPV4 340 aa12.76□□□□□ -0.37
CDH3-205ENST00000566808 M0R129 80 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 GNGT2O14610 69 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 DEDDO75618 318 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 NDUFA3O95167 84 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 CD40LGP29965 261 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 CRISP1P54107 249 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 TMEM267Q0VDI3 215 aaPredicted RBP12.75□□□□□ -0.37
CDH3-205ENST00000566808 KLF5Q13887 457 aaPredicted RBP12.75□□□□□ -0.37
CDH3-205ENST00000566808 ZSCAN26Q16670 478 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 ACTBL2Q562R1 376 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 LAX1Q8IWV1 398 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 SUMF2Q8NBJ7 301 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 PXT1Q8NFP0 134 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 NPBQ8NG41 125 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 OR13C3Q8NGS6 347 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 OR10AC1Q8NH08 325 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 RGP1Q92546 391 aaPredicted RBP12.75□□□□□ -0.37
CDH3-205ENST00000566808 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
CDH3-205ENST00000566808 CT45A1Q5HYN5 189 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 STEAP3Q658P3 488 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 OR10H4Q8NGA5 316 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 CT45A3Q8NHU0 189 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 ABHD5Q8WTS1 349 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 CPNE2Q96FN4 548 aaPredicted RBP12.74□□□□□ -0.37
CDH3-205ENST00000566808 RITA1Q96K30 269 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 MS4A10Q96PG2 267 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 RAB9BQ9NP90 201 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 ETAA1Q9NY74 926 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 CNOT2Q9NZN8 540 aaKnown RBP12.74□□□□□ -0.37
CDH3-205ENST00000566808 NUBP2Q9Y5Y2 271 aa12.74□□□□□ -0.37
CDH3-205ENST00000566808 ABCA13Q86UQ4 5058 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 PRKACGP22612 351 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 ZNF134P52741 427 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 CX3CL1P78423 397 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 PTGES3Q15185 160 aaKnown RBP12.73□□□□□ -0.37
CDH3-205ENST00000566808 MOGAT2Q3SYC2 334 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 CEMP1Q6PRD7 247 aaPredicted RBP12.73□□□□□ -0.37
CDH3-205ENST00000566808 TCEANCQ8N8B7 351 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 OR51A4Q8NGJ6 313 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 OR2K2Q8NGT1 345 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 NEURL2Q9BR09 285 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 MRPL20Q9BYC9 149 aaKnown RBP12.73□□□□□ -0.37
CDH3-205ENST00000566808 SLC2A8Q9NY64 477 aa12.73□□□□□ -0.37
CDH3-205ENST00000566808 WARS2Q9UGM6 360 aaKnown RBP12.73□□□□□ -0.37
CDH3-205ENST00000566808 KLK5Q9Y337 293 aaPredicted RBP12.73□□□□□ -0.37
CDH3-205ENST00000566808 IZUMO1RA6ND01 250 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 SULT1B1O43704 296 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms