RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 LIN7CQ9NUP9 197 aaKnown RBP9.42□□□□□ -0.9
UBR1-206ENST00000566493 GFOD1Q9NXC2 390 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 ZNF581Q9P0T4 197 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 IGHV3-43A0A0B4J1X8 118 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 C15orf65H3BRN8 121 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 OGG1O15527 345 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 SPINT2O43291 252 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 WBP4O75554 376 aaKnown RBP9.41□□□□□ -0.9
UBR1-206ENST00000566493 MT-ND4P03905 459 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 IGHV3-43DP0DP04 118 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 CD1BP29016 333 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 GPR12P47775 334 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 RAB25P57735 213 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 PNLIPRP3Q17RR3 467 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 ZNF497Q6ZNH5 498 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 C18orf65Q6ZTR6 163 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 UBALD1Q8TB05 177 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 RTN4IP1Q8WWV3 396 aaPredicted RBP9.41□□□□□ -0.9
UBR1-206ENST00000566493 GHSRQ92847 366 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 SMIM19Q96E16 107 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 RDH12Q96NR8 316 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 ABCG5Q9H222 651 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 SMPD3Q9NY59 655 aaPredicted RBP9.41□□□□□ -0.9
UBR1-206ENST00000566493 TRAPPC2LQ9UL33 140 aa9.41□□□□□ -0.9
UBR1-206ENST00000566493 EXOSC1Q9Y3B2 195 aaKnown RBP9.41□□□□□ -0.9
UBR1-206ENST00000566493 LINC01548A6NM66 108 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 CCL24O00175 119 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 TXNL1O43396 289 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 RRP9O43818 475 aaKnown RBP9.4□□□□□ -0.9
UBR1-206ENST00000566493 MOSP00540 346 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 DGCR2P98153 550 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 GPR50Q13585 617 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 Q3ZCU0 254 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 Q499Y3 187 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 YIF1BQ5BJH7 314 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 CXorf66Q5JRM2 361 aaPredicted RBP9.4□□□□□ -0.9
UBR1-206ENST00000566493 C6orf183Q5T699 404 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 C11orf87Q6NUJ2 197 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 Q8N9W7 124 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 OR8H1Q8NGG4 311 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 OR13C5Q8NGS8 318 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 ORAI1Q96D31 301 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 MRPS24Q96EL2 167 aaKnown RBP9.4□□□□□ -0.9
UBR1-206ENST00000566493 TMEM80Q96HE8 168 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 S1PR3Q99500 378 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 P2RX4Q99571 388 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 ETAA1Q9NY74 926 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 GNG12Q9UBI6 72 aa9.4□□□□□ -0.9
UBR1-206ENST00000566493 DIMT1Q9UNQ2 313 aaKnown RBP9.4□□□□□ -0.9
UBR1-206ENST00000566493 MRPS28Q9Y2Q9 187 aaKnown RBP9.4□□□□□ -0.9
UBR1-206ENST00000566493 SIRT4Q9Y6E7 314 aaPredicted RBP9.4□□□□□ -0.9
UBR1-206ENST00000566493 TRBV5-5A0A0J9YX44 114 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 A0A1W2PP11 408 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 C12orf77C9JDV5 145 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 GPX5O75715 221 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
UBR1-206ENST00000566493 IGFBP3P17936 291 aaPredicted RBP9.39□□□□□ -0.91
UBR1-206ENST00000566493 FOXE3Q13461 319 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 SYT6Q5T7P8 510 aaPredicted RBP9.39□□□□□ -0.91
UBR1-206ENST00000566493 DMKNQ6E0U4 476 aaPredicted RBP9.39□□□□□ -0.91
UBR1-206ENST00000566493 RAB12Q6IQ22 244 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 TRAT1Q6PIZ9 186 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 GLIPR1L1Q6UWM5 242 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 PRR18Q8N4B5 295 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 Q8N6K4 173 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 OR8U1Q8NH10 309 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 MUL1Q969V5 352 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 ST6GALNAC6Q969X2 333 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 RAX2Q96IS3 184 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 CLEC2DQ9UHP7 191 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 PEX16Q9Y5Y5 336 aa9.39□□□□□ -0.91
UBR1-206ENST00000566493 H0YHG0 523 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 RAMP3O60896 148 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 ELANEP08246 267 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 VDAC1P21796 283 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 SOX6P35712 828 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 TTC23Q5W5X9 447 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 FAM53AQ6NSI3 398 aaPredicted RBP9.38□□□□□ -0.91
UBR1-206ENST00000566493 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 SLC25A48Q6ZT89 311 aaKnown RBP9.38□□□□□ -0.91
UBR1-206ENST00000566493 CDH26Q8IXH8 852 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 ZFP41Q8N8Y5 198 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 TMEM104Q8NE00 496 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 SETD9Q8NE22 299 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 OR10V1Q8NGI7 309 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 OR5M8Q8NGP6 311 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 OR4K15Q8NH41 348 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 SELENOIQ9C0D9 397 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 KCNIP1Q9NZI2 227 aa9.38□□□□□ -0.91
UBR1-206ENST00000566493 RCC2Q9P258 522 aaKnown RBP9.38□□□□□ -0.91
UBR1-206ENST00000566493 TRAV8-7A0A075B6U6 113 aa9.37□□□□□ -0.91
UBR1-206ENST00000566493 A0A1W2PPK0 400 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms