RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 Q96M85 177 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OXGR1Q96P68 337 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ZNF317Q96PQ6 595 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC38A2Q96QD8 506 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NMNAT3Q96T66 252 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ZBTB18Q99592 522 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CGREF1Q99674 301 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 MCHR1Q99705 422 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 RASL11BQ9BPW5 248 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 KCNS3Q9BQ31 491 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ECSITQ9BQ95 431 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TAPBPLQ9BX59 468 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 POTEKPQ9BYX7 375 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 OR2J1Q9GZK6 312 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NSRP1Q9H0G5 558 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 IFI27L2Q9H2X8 130 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 ZNF385DQ9H6B1 395 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NMNAT1Q9HAN9 279 aaPredicted RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 TMEM27Q9HBJ8 222 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 BCL2L10Q9HD36 194 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 GLRX2Q9NS18 164 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CA10Q9NS85 328 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 CBLN4Q9NTU7 201 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 UFSP2Q9NUQ7 469 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 UBAP1Q9NZ09 502 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 GLTPQ9NZD2 209 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 DUX4Q9UBX2 424 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TRAPPC4Q9Y296 219 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SLC35A3Q9Y2D2 325 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 POFUT2Q9Y2G5 429 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 SIGLEC9Q9Y336 463 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 NDUFAF1Q9Y375 327 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 TMED5Q9Y3A6 229 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 UGT2A1Q9Y4X1 527 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 YTHDF2Q9Y5A9 579 aaKnown RBP0.84□□□□□ -2.27
SMG1-212ENST00000566328 IER3IP1Q9Y5U9 82 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 U3KQV3 271 aa0.84□□□□□ -2.27
SMG1-212ENST00000566328 MGAM2Q2M2H8 2515 aa0.84□□□□□ -2.28
SMG1-212ENST00000566328 TET2Q6N021 2002 aaPredicted RBP0.84□□□□□ -2.28
SMG1-212ENST00000566328 HECTD4Q9Y4D8 3996 aa0.84□□□□□ -2.28
SMG1-212ENST00000566328 NBEAL2Q6ZNJ1 2754 aa0.84□□□□□ -2.28
SMG1-212ENST00000566328 DNAH17Q9UFH2 4485 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PCLOQ9Y6V0 5065 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SORL1Q92673 2214 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TRAV39A0A0B4J263 110 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 C13orf42A0A1B0GVH6 325 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 A0A1W2PRG6 482 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SMIM30A4D0T7 59 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ISPDA4D126 451 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TRAPPC13A5PLN9 417 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 GMNCA6NCL1 334 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 FAM183AA6NL82 134 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZNF99A8MXY4 864 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 EFCAB9A8MZ26 197 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ANKRD65E5RJM6 399 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RPL36A-HNRNPH2H7BZ11 118 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 K7N7A8 449 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZNF593O00488 134 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 CXCR6O00574 342 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 GPR171O14626 319 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 MRASO14807 208 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ANGPT2O15123 496 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC16A7O60669 478 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 EIF1BO60739 113 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 EDF1O60869 148 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 GMNNO75496 209 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SERPINB7O75635 380 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR7A10O76100 309 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SOX14O95416 240 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 AHSA1O95433 338 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TGDSO95455 350 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 IGHV3-7P01780 117 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 GYPAP02724 150 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SERPINA5P05154 406 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 KRT16P08779 473 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 MMP7P09237 267 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 ASAH2BP0C7U1 165 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PGA4P0DJD7 388 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PGA3P0DJD8 388 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 IFI30P13284 250 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ETS2P15036 469 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZNF250P15622 560 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 HIST1H1CP16403 213 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 CTLA4P16410 223 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 COX5AP20674 150 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 COX7A1P24310 79 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 CD24P25063 80 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 STOMP27105 288 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ELK4P28324 431 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LCN1P31025 176 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 GGT2P36268 569 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ARR3P36575 388 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SRP14P37108 136 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 MDH1P40925 334 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 OMPP47874 163 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 HTR5AP47898 357 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 GSSP48637 474 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 NUDT2P50583 147 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PRKXP51817 358 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 CRISP3P54108 245 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms