RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	F2R	P25116	425 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	RPS23	P62266	143 aa	Known RBP	11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	RUNX1	Q01196	453 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	HIKESHI	Q53FT3	197 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	ZNF880	Q6PDB4	577 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	RBMS3	Q6XE24	437 aa	Known RBP	11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	CMTM1	Q8IZ96	169 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	ZNF295-AS1	Q8N0V1	137 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	TMEM217	Q8N7C4	229 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	HIPK2	Q9H2X6	1198 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	RIMS4	Q9H426	269 aa	Predicted RBP	11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	KIAA1456	Q9P272	454 aa		11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.21	□□□□□ -0.61
SCAPER-215	ENST00000565507	PIEZO2	Q9H5I5	2752 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	IGHV2-5	P01817	119 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	CEACAM1	P13688	526 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	CBR1	P16152	277 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	SPINK2	P20155	84 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	MAGEA5	P43359	124 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	LINC00696	Q6ZRV3	163 aa		11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	SNIP1	Q8TAD8	396 aa	Known RBP	11.21	□□□□□ -0.62
SCAPER-215	ENST00000565507	BTBD17	A6NE02	478 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	SLC33A1	O00400	549 aa	Predicted RBP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	S100A6	P06703	90 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	S100A12	P80511	92 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	ZNF154	Q13106	437 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	HAGH	Q16775	308 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	DDA1	Q9BW61	102 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	PLK3	Q9H4B4	646 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	METTL1	Q9UBP6	276 aa	Known RBP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	OR2W1	Q9Y3N9	320 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	RELN	P78509	3460 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	SRP19	P09132	144 aa	Known RBP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	ARR3	P36575	388 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	WNT5A	P41221	380 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	ADAM5	Q6NVV9	412 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	LINC00596	Q86U02	117 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	C17orf78	Q8N4C9	275 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	RDH5	Q92781	318 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	APH1A	Q96BI3	265 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	TTTY12	Q9BZ98	90 aa		11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	SEBOX	Q9HB31	216 aa	Predicted RBP	11.2	□□□□□ -0.62
SCAPER-215	ENST00000565507	DOCK7	Q96N67	2140 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	NBEA	Q8NFP9	2946 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	FAM166B	A8MTA8	275 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	HS3ST1	O14792	307 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	SYNGR4	O95473	234 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	ZNF14	P17017	642 aa	Predicted RBP	11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	GPR146	Q96CH1	333 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	HIST1H2AA	Q96QV6	131 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	ZPBP	Q9BS86	351 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	B4GALT7	Q9UBV7	327 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	IGLV2-14	P01704	120 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	S100A8	P05109	93 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	FABP9	Q0Z7S8	132 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	TCF15	Q12870	199 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	ICAM4	Q14773	271 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507		Q6ZRM9	215 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	NUFIP2	Q7Z417	695 aa	Known RBP	11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	VASH2	Q86V25	355 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	ATP5S	Q99766	215 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	CABLES2	Q9BTV7	478 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	OPA3	Q9H6K4	179 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	DLL3	Q9NYJ7	618 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	LIPG	Q9Y5X9	500 aa		11.19	□□□□□ -0.62
SCAPER-215	ENST00000565507	ARGFX	A6NJG6	315 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507		H3BQ15	152 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	WNT2	P09544	360 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	OR8U8	P0C7N1	319 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	SMIM6	P0DI80	62 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	HLA-DRB3	P79483	266 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	IL24	Q13007	206 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	OR8G1	Q15617	311 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	ABHD17B	Q5VST6	288 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	FAM58A	Q8N1B3	248 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	TMEM251	Q8N6I4	163 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507		A0A1B0GU03	582 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	TXNL1	O43396	289 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	RHBDL1	O75783	438 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	SCAF4	O95104	1147 aa	Known RBP	11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	IGKV1-39	P01597	117 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	IGKV1D-39	P04432	117 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	PSG2	P11465	335 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	SLC25A6	P12236	298 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	ITGA3	P26006	1051 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	TAS2R30	P59541	319 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	OR2B8P	P59922	312 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	GNG3	P63215	75 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	OR1C1	Q15619	314 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	IGFBP7	Q16270	282 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	IZUMO4	Q1ZYL8	232 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	HEPN1	Q6WQI6	88 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	ZNF573	Q86YE8	665 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	C1QL4	Q86Z23	238 aa		11.18	□□□□□ -0.62
SCAPER-215	ENST00000565507	OR51H1	Q8NH63	302 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms