RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SCGB1D1O95968 90 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SERPINE2P07093 398 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OTX1P32242 354 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 NMSQ5H8A3 153 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 TMEM183AQ8IXX5 376 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ZIC4Q8N9L1 334 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 IGKV1-6A0A0C4DH72 117 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 LRRC3CA6NJW4 275 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 MSX1P28360 303 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PSG4Q00888 419 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PMP22Q01453 160 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 DAZAP2Q15038 168 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 LHFPL2Q6ZUX7 228 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OR13D1Q8NGV5 346 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 LHX4Q969G2 390 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 GTF3C1Q12789 2109 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 LTBRP36941 435 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 C20orf204Q6ZNR8 217 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 WDR5BQ86VZ2 330 aa17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ERRFI1Q9UJM3 462 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-206ENST00000564844 UBE2L5PA0A1B0GUS4 154 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ZNF737O75373 536 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CHRNA7P36544 502 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 WNT5AP41221 380 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 H3F3AP84243 136 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ANKRD39Q53RE8 183 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SLC25A45Q8N413 288 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 TMEM56Q96MV1 263 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 DKKL1Q9UK85 242 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 TMEM56-RWDD3S4R434 201 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 A0A1W2PR77 199 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 MAP1LC3B2A6NCE7 125 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PPP5D1E7EU14 171 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SNIP1Q8TAD8 396 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 MAP1LC3BQ9GZQ8 125 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 RNF115Q9Y4L5 304 aa17.54■□□□□ 0.4
MAP1LC3B-206ENST00000564844 A0A096LPE4 126 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 A0A1W2PPZ6 126 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 GALR1P47211 349 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 TMPRSS7Q7RTY8 843 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ZNF295-AS1Q8N0V1 137 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PRSS50Q9UI38 385 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 A0A0U1RQK1 487 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SYNGR3O43761 229 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PGLYRP1O75594 196 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CEACAM16Q2WEN9 425 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ADPRHL1Q8NDY3 354 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PIAS2O75928 621 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CD27P26842 260 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 UCP3P55916 312 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CDCA3Q99618 268 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SLC39A9Q9NUM3 307 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PSENENQ9NZ42 101 aa17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CHCHD2Q9Y6H1 151 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-206ENST00000564844 A6NNC1 897 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 H7BYZ3 331 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CRYGSP22914 178 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SPCS3P61009 180 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SLC25A53Q5H9E4 307 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CST9LP1Q5W188 147 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 RHBDD2Q6NTF9 364 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 FAM185AQ8N0U4 392 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OR4F5Q8NH21 305 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OR4F4Q96R69 305 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 EXPH5Q8NEV8 1989 aa17.52■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OPN1MWP04001 364 aa17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 OPN1MW2P0DN77 364 aa17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 OPN1MW3P0DN78 364 aa17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 ZXDAP98168 799 aa17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 IL24Q13007 206 aa17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 H1FOOQ8IZA3 346 aaPredicted RBP17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 TMEM54Q969K7 222 aa17.52■□□□□ 0.39
MAP1LC3B-206ENST00000564844 ZNF816-ZNF321PA0A0X1KG74 233 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 IGKV1D-33P01593 117 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 IGKV1-33P01594 117 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 HNF1AP20823 631 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 RPL29P47914 159 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 SRPXP78539 464 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 EIF3IQ13347 325 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 SLC10A1Q14973 349 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 SPINK9Q5DT21 86 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 FAM27BQ5VT28 67 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 TMEM211Q6ICI0 200 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 HLA-CQ95604 372 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 OR4C12Q96R67 309 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 CISD1Q9NZ45 108 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 MDH2P40926 338 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 FUT6P51993 359 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 BATFQ16520 125 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 BSXQ3C1V8 233 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 C10orf128Q5T292 105 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 TEX38Q6PEX7 206 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 C17orf82Q86X59 251 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 OR56B2PQ8NGI1 322 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 C2orf88Q9BSF0 95 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 NDUFAF3Q9BU61 184 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 SNHG12Q9BXW3 62 aa17.51■□□□□ 0.39
MAP1LC3B-206ENST00000564844 KCNS2Q9ULS6 477 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms