RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CTNSO60931 367 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 CBR3O75828 277 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 PTHP01270 115 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 IGLV3-27P01718 113 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 MT-ND4P03905 459 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 IL6P05231 212 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 RHOCP08134 193 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 RPS17P08708 135 aaKnown RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 CYBAP13498 195 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 PPIBP23284 216 aaKnown RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 RPS3P23396 243 aaKnown RBP eCLIP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 CD52P31358 61 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 CDK9P50750 372 aaKnown RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 POLR2JP52435 117 aaKnown RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 ZNF140P52738 457 aaPredicted RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 GABARAPL2P60520 117 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 GNA12Q03113 381 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 MGAT3Q09327 533 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 APOFQ13790 326 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 IMPG1Q17R60 797 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 RBM48Q5RL73 367 aaKnown RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 PTRHD1Q6GMV3 140 aaKnown RBP2.68□□□□□ -1.98
LINC00560-201ENST00000564593 ERICH5Q6P6B1 374 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 NEGR1Q7Z3B1 354 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 GATSQ8NAP1 163 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 TMEM104Q8NE00 496 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 OR4M1Q8NGD0 313 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 OR52E4Q8NGH9 312 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 RAB2BQ8WUD1 216 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 CDS1Q92903 461 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 BORCS5Q969J3 196 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 PPP1R36Q96LQ0 422 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 FAM210AQ96ND0 272 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 KCNS3Q9BQ31 491 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 SHCBP1LQ9BZQ2 653 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 ANKHQ9HCJ1 492 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 HEBP1Q9NRV9 189 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 IL37Q9NZH6 218 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 ZNF257Q9Y2Q1 563 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 FIS1Q9Y3D6 152 aa2.68□□□□□ -1.98
LINC00560-201ENST00000564593 PRORSD1PA6NEY8 169 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 EVPLLA8MZ36 301 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 GNGT2O14610 69 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 HCRTO43612 131 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 ZMPSTE24O75844 475 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 MYO1DO94832 1006 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 MBP02144 154 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 C8GP07360 202 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 LCN1P31025 176 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 CFHR2P36980 270 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 TMBIM6P55061 237 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 RHOAP61586 193 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 EMX2Q04743 252 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 KRR1Q13601 381 aaKnown RBP2.67□□□□□ -1.98
LINC00560-201ENST00000564593 OR1Q1Q15612 314 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 LY6EQ16553 131 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 SLC25A35Q3KQZ1 300 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 TEX30Q5JUR7 227 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 C6orf52Q5T4I8 152 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 GUSBP11Q6P575 273 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 NDUFAF7Q7L592 441 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 HMGN2P46Q86SG4 172 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 SLC30A8Q8IWU4 369 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 C8orf59Q8N0T1 100 aaPredicted RBP2.67□□□□□ -1.98
LINC00560-201ENST00000564593 ZNF561Q8N587 486 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 RNF182Q8N6D2 247 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 WDR31Q8NA23 367 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 C17orf50Q8WW18 174 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 CYGBQ8WWM9 190 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 S100ZQ8WXG8 99 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 KCNS1Q96KK3 526 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 OR4K3Q96R72 315 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 CIB1Q99828 191 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 APOL4Q9BPW4 351 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 OR52A5Q9H2C5 316 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 PARVBQ9HBI1 364 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 RBFOX1Q9NWB1 397 aaKnown RBP2.67□□□□□ -1.98
LINC00560-201ENST00000564593 C21orf62Q9NYP8 219 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 OPTCQ9UBM4 332 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 CD300AQ9UGN4 299 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 CES1P1Q9UKY3 287 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 DNAJC15Q9Y5T4 150 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 HSPE1-MOB4S4R3N1 261 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 COL4A6Q14031 1691 aa2.67□□□□□ -1.98
LINC00560-201ENST00000564593 IGLV3-12A0A075B6K2 115 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 IGHV3-49A0A0A0MS15 119 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 A0A0B4J2E0 115 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 MANBAO00462 879 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 SLC22A1O15245 554 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 UGT2B11O75310 529 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 CDK14O94921 469 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 IFNA14P01570 189 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 S100A6P06703 90 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 KLK1P06870 262 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 CCL2P13500 99 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 ZNF3P17036 446 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 APLNRP35414 380 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 SPAM1P38567 509 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 HTR2BP41595 481 aa2.66□□□□□ -1.98
LINC00560-201ENST00000564593 PSMD7P51665 324 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms