RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 USF3Q68DE3 2245 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 LOC105371242A0A075B767 164 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 IGKV1D-8A0A087WSZ0 117 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 TRAV39A0A0B4J263 110 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 PLA2G10O15496 165 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 RGS11O94810 467 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 LIPFP07098 398 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 SCTP09683 121 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 USF1P22415 310 aaPredicted RBP10.6□□□□□ -0.71
CLK3-214ENST00000564096 ZBTB25P24278 435 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 RFX2P48378 723 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 IDO2Q6ZQW0 420 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 OR10A7Q8NGE5 316 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 OR4D10Q8NGI6 311 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 OR51S1Q8NGJ8 323 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 OR6F1Q8NGZ6 308 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 OR56B4Q8NH76 319 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 C8orf46Q8TAG6 207 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 DMRTB1Q96MA1 342 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 GNG12Q9UBI6 72 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 SLC23A1Q9UHI7 598 aa10.6□□□□□ -0.71
CLK3-214ENST00000564096 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
CLK3-214ENST00000564096 TRBV6-7A0A0A0MS04 114 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 PPIAL4CA0A0B4J2A2 164 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 IGHV4-61A0A0C4DH41 118 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 FAM172BPA6NC97 362 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 C15orf65H3BRN8 121 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 RBP4P02753 201 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 ZNF728P0DKX0 622 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 PPIAL4GP0DN37 164 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 FPR2P25090 351 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 SLC6A1P30531 599 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 HTD2P86397 168 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 ZNF273Q14593 569 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 IGSF11Q5DX21 431 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 PLET1Q6UQ28 207 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 BTNL3Q6UXE8 466 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 TCF23Q7RTU1 214 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 FGFRL1Q8N441 504 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 OR1L1Q8NH94 360 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 SCGB3A2Q96PL1 93 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 SLC25A21Q9BQT8 299 aaPredicted RBP10.59□□□□□ -0.71
CLK3-214ENST00000564096 ZNF2Q9BSG1 426 aaPredicted RBP10.59□□□□□ -0.71
CLK3-214ENST00000564096 OR2S2Q9NQN1 319 aa10.59□□□□□ -0.71
CLK3-214ENST00000564096 PTPN13Q12923 2485 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 F2RL2O00254 374 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 SDCBPO00560 298 aaPredicted RBP10.58□□□□□ -0.72
CLK3-214ENST00000564096 PHF1O43189 567 aaPredicted RBP10.58□□□□□ -0.72
CLK3-214ENST00000564096 FCGR2CP31995 323 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 BTCP35070 178 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 LMO4P61968 165 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 HERPUD1Q15011 391 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 SURF2Q15527 256 aaPredicted RBP10.58□□□□□ -0.72
CLK3-214ENST00000564096 TMEM200BQ69YZ2 307 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 NRARPQ7Z6K4 114 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 OR52M1Q8NGK5 317 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 FOXC2Q99958 501 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 LINC00574Q9H8X3 128 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 IDI2-AS1Q9NZ38 188 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 NUBP2Q9Y5Y2 271 aa10.58□□□□□ -0.72
CLK3-214ENST00000564096 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 MEX3AA1L020 520 aaKnown RBP10.57□□□□□ -0.72
CLK3-214ENST00000564096 C22orf46C9J442 243 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 M0R1W7 72 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 FCN3O75636 299 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 NDUFB6O95139 128 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 PPYP01298 95 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 CCL3L1P16619 93 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 CCR6P51684 374 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 OXA1LQ15070 435 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 LTC4SQ16873 150 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 C17orf58Q2M2W7 97 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 PRAMEF5Q5TYX0 476 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 H1FOOQ8IZA3 346 aaPredicted RBP10.57□□□□□ -0.72
CLK3-214ENST00000564096 TERB2Q8NHR7 220 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 UBALD1Q8TB05 177 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 CHPT1Q8WUD6 406 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 GIMAP1Q8WWP7 306 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 CREB3L1Q96BA8 519 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 MOB3AQ96BX8 217 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 C20orf85Q9H1P6 137 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 OR1A1Q9P1Q5 309 aa10.57□□□□□ -0.72
CLK3-214ENST00000564096 RBM7Q9Y580 266 aaKnown RBP10.57□□□□□ -0.72
CLK3-214ENST00000564096 IGHV2-70DA0A0C4DH43 119 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 KIAA1324LA8MWY0 1029 aaPredicted RBP10.56□□□□□ -0.72
CLK3-214ENST00000564096 ZNF735P0CB33 412 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 CGB3P0DN86 165 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 CGB7P0DN87 165 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 PGAM2P15259 253 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 NFYAP23511 347 aaPredicted RBP10.56□□□□□ -0.72
CLK3-214ENST00000564096 S100GP29377 79 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 CEACAM6P40199 344 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 RAB7AP51149 207 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 FXYD4P59646 89 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms