RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 NARFLQ9H6Q4 476 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 OR6C3Q9NZP0 311 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 OR1A1Q9P1Q5 309 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 PCDHB10Q9UN67 800 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 VSIG4Q9Y279 399 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 MALRD1Q5VYJ5 2156 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 INMT-MINDY4F8WBC2 141 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 GZMHP20718 246 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 RAB25P57735 213 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 ZNF273Q14593 569 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 H1FOOQ8IZA3 346 aaPredicted RBP8.4□□□□□ -1.06
SMG1-208ENST00000563448 ZNF565Q8N9K5 539 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 OR8B3Q8NGG8 313 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 RFESDQ8TAC1 157 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 MARCH1Q8TCQ1 289 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 GIMAP1Q8WWP7 306 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 IL1F10Q8WWZ1 152 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 H1FXQ92522 213 aaKnown RBP8.4□□□□□ -1.06
SMG1-208ENST00000563448 OR8B2Q96RD0 313 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 SLC25A21Q9BQT8 299 aaPredicted RBP8.4□□□□□ -1.06
SMG1-208ENST00000563448 GSX2Q9BZM3 304 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 BPESC1Q9GZL8 116 aa8.4□□□□□ -1.06
SMG1-208ENST00000563448 BARX1Q9HBU1 254 aaPredicted RBP8.4□□□□□ -1.06
SMG1-208ENST00000563448 FBN2P35556 2912 aa8.4□□□□□ -1.07
SMG1-208ENST00000563448 hCG_2014768A0A024R1R8 64 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 TRGV10A0A0A0MS01 117 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 A0A0B4J293 547 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 hADV38S2A0JD32 116 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 NPIPB11E5RHQ5 1161 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 HEXAP06865 529 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 AADACP22760 399 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 NPY4RP50391 375 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 RPL31P62899 125 aaKnown RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 MEF2CQ06413 473 aaPredicted RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 WDR25Q64LD2 544 aaPredicted RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 TMEM200BQ69YZ2 307 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 FAM53AQ6NSI3 398 aaPredicted RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 OR52L2PQ8NGH6 319 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 OR10J5Q8NHC4 309 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 GALMQ96C23 342 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 FXYD6Q9H0Q3 95 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 CALYQ9NYX4 217 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 SLC23A1Q9UHI7 598 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 OPN4Q9UHM6 478 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 UBE2J1Q9Y385 318 aaPredicted RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 LINC00312Q9Y6C7 94 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 ANKRD17O75179 2603 aaKnown RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 GCN1Q92616 2671 aaKnown RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 IGHV3-43A0A0B4J1X8 118 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 ZNF729A6NN14 1252 aaPredicted RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 SPINT2O43291 252 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 TUSC2O75896 110 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 DIRAS3O95661 229 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 IGHV3-43DP0DP04 118 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 IL2RGP31785 369 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 MECP2P51608 486 aaKnown RBP8.39□□□□□ -1.07
SMG1-208ENST00000563448 HTD2P86397 168 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 NLRC3Q7RTR2 1065 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 LDLRAD3Q86YD5 345 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 ZDHHC22Q8N966 263 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 FAM168AQ92567 244 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 TOLLIPQ9H0E2 274 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 BEX1Q9HBH7 125 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 CLN8Q9UBY8 286 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 GPR132Q9UNW8 380 aa8.39□□□□□ -1.07
SMG1-208ENST00000563448 KBTBD11-OT1A0A1B0GTJ5 212 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 VWC2LB2RUY7 222 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 F2RL2O00254 374 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 PPYP01298 95 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 IGHV2-5P01817 119 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 RLN1P04808 185 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 VSIG10L2P0DP72 767 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 CCL3L1P16619 93 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 ANXA7P20073 488 aaKnown RBP8.38□□□□□ -1.07
SMG1-208ENST00000563448 OMGP23515 440 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 ZBTB25P24278 435 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 FPR2P25090 351 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 RAG2P55895 527 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 FXYD4P59646 89 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 BAMBIQ13145 260 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 GNMTQ14749 295 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 LTC4SQ16873 150 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 FAM185AQ8N0U4 392 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 CLDND2Q8NHS1 167 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 MOB3AQ96BX8 217 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 PIMREGQ9BSJ6 248 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 TAS2R3Q9NYW6 316 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 LPAR3Q9UBY5 353 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 ZNF69Q9UC07 566 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 CR1P17927 2039 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 CELSR2Q9HCU4 2923 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 ABCA2Q9BZC7 2435 aa8.38□□□□□ -1.07
SMG1-208ENST00000563448 TRBV23-1A0A0A0MS06 115 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 IGKV1D-13A0A0B4J2D9 117 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 NDUFS8O00217 210 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 GPR37O15354 613 aa8.37□□□□□ -1.07
SMG1-208ENST00000563448 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms