RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 ST20-AS1Q8NBB2 130 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNRF2Q8NHG8 242 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 DTD1Q8TEA8 209 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CASTOR1Q8WTX7 329 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 MAL2Q969L2 176 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 RMI2Q96E14 147 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 CCDC42Q96M95 316 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 PEBP4Q96S96 227 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF2Q9BSG1 426 aaPredicted RBP1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 TMEM208Q9BTX3 173 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 SLC22A4Q9H015 551 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 GABARAPL1Q9H0R8 117 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 RHOFQ9HBH0 211 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 C19orf12Q9NSK7 152 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 STOML2Q9UJZ1 356 aa1.85□□□□□ -2.11
SHCBP1-202ENST00000563219 DNMT1P26358 1616 aaKnown RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 PLB1Q6P1J6 1458 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 UQCRHLA0A096LP55 91 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 IGHV2-26A0A0B4J1V2 119 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 A0A1B0GTI1 187 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 GNG14A0A1W2PPG7 69 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 DAPL1A0PJW8 107 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 TMEM213A2RRL7 107 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 FUOMA2VDF0 154 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 F5H5T6 163 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 FGF16O43320 207 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 STX10O60499 249 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 IFNA6P05013 189 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 UQCRHP07919 91 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 SERPINA6P08185 405 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 GABRA1P14867 456 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF14P17017 642 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 PRPS1L1P21108 318 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 G0S2P27469 103 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 COILP38432 576 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 PMELP40967 661 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 IDH2P48735 452 aaKnown RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 SMCO1Q147U7 214 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 C4orf26Q17RF5 130 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 GOLGA7BQ2TAP0 167 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 LINC00303Q3SY05 128 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 ZCWPW2Q504Y3 356 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 KPRPQ5T749 579 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 SDHAF4Q5VUM1 108 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 GLYATQ6IB77 296 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM45BPQ6NSW5 357 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 SPNS3Q6ZMD2 512 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 ADM2Q7Z4H4 148 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 HMGN2P46Q86SG4 172 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 CLVS1Q8IUQ0 354 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 RNF182Q8N6D2 247 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 ZIC4Q8N9L1 334 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 OR4P4Q8NGL7 312 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 OR4A5Q8NH83 315 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 PPWD1Q96BP3 646 aaKnown RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 RMND5BQ96G75 393 aaPredicted RBP1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 REEP6Q96HR9 211 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 OLFM3Q96PB7 478 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 RBP7Q96R05 134 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 PRSS27Q9BQR3 290 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 ZNF426Q9BUY5 554 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 OR51B6Q9H340 312 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 FAM60AQ9NP50 221 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 USE1Q9NZ43 259 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 C3orf18Q9UK00 162 aa1.84□□□□□ -2.11
SHCBP1-202ENST00000563219 USP42Q9H9J4 1324 aaKnown RBP1.84□□□□□ -2.12
SHCBP1-202ENST00000563219 IGLV2-18A0A075B6J9 118 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 A0A0B4J2C4 111 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 EFCAB10A6NFE3 127 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 C16orf90A8MZG2 172 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 FTCDNL1E5RQL4 147 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 F5H5K5 113 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 K7EPK0 472 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 K7EQS6 105 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 K7ERS5 55 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 PFDN1O60925 122 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 NOS1APO75052 506 aaPredicted RBP1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 DEXIO95424 95 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 PSMG1O95456 288 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 DHFRP00374 187 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 IGLV7-43P04211 117 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 HSD11B1P28845 292 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 MPV17P39210 176 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 EMP2P54851 167 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 SPCS3P61009 180 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 MAGOHP61326 146 aaKnown RBP1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 TSPAN31Q12999 210 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM53BQ14153 422 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 AKIRIN2Q53H80 203 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 CENPWQ5EE01 88 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 DNLZQ5SXM8 178 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 LDLRAD2Q5SZI1 272 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 CLEC18BQ6UXF7 455 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 AMN1Q8IY45 258 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 ZFP82Q8N141 532 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 OR5D18Q8NGL1 313 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 SHANK2-AS3Q9BTD1 123 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 SCRT1Q9BWW7 348 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 RSPO3Q9BXY4 272 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms