RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 C15orf40Q8WUR7 153 aa15.4■□□□□ 0.06
RAB40C-207ENST00000563109 DIRAS2Q96HU8 199 aa15.4■□□□□ 0.06
RAB40C-207ENST00000563109 KIRREL1Q96J84 757 aa15.4■□□□□ 0.06
RAB40C-207ENST00000563109 SUCNR1Q9BXA5 334 aa15.4■□□□□ 0.06
RAB40C-207ENST00000563109 TMEM133Q9H2Q1 129 aa15.4■□□□□ 0.06
RAB40C-207ENST00000563109 IGHV3OR16-10A0A075B7F0 116 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 SDCBPO00560 298 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-207ENST00000563109 MMP23AO75900 390 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 CBX5P45973 191 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 DLX1P56177 255 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 PRB3Q04118 309 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-207ENST00000563109 SNX29P2Q8IUI4 249 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 PDZD9Q8IXQ8 264 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 UBALD1Q8TB05 177 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 TNFRSF14Q92956 283 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 GALMQ96C23 342 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 CLEC7AQ9BXN2 247 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 ZNF286AQ9HBT8 521 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 RABL2AQ9UBK7 228 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-207ENST00000563109 NUP50Q9UKX7 468 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 RABL2BQ9UNT1 228 aa15.39■□□□□ 0.05
RAB40C-207ENST00000563109 IGHV1-69DA0A0B4J2H0 117 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 CENPVL3A0A0U1RRI6 287 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 TRDCB7Z8K6 153 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 RNASEK-C17orf49H0YIS7 233 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 F2RL2O00254 374 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 TPPPO94811 219 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 FSHBP01225 129 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 IGHV1-69P01742 117 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 IGHV4-38-2P0DP08 117 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 SRD5A1P18405 259 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 PRSS3P35030 304 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 GDNFP39905 211 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 UBE2E1P51965 193 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 BPIFB3P59826 476 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 MADCAM1Q13477 382 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 SRSF7Q16629 238 aaKnown RBP eCLIP15.38■□□□□ 0.05
RAB40C-207ENST00000563109 KLF17Q5JT82 389 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-207ENST00000563109 Q6ZPA2 131 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 PNKDQ8N490 385 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 OR52M1Q8NGK5 317 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 OR1L1Q8NH94 360 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 IFT46Q9NQC8 304 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 GNG12Q9UBI6 72 aa15.38■□□□□ 0.05
RAB40C-207ENST00000563109 ZNF230Q9UIE0 474 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-207ENST00000563109 HIVEP2P31629 2446 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 TLN2Q9Y4G6 2542 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 IGHV2-26A0A0B4J1V2 119 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 SSX5O60225 188 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 PTHLHP12272 177 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 CNPY1Q3B7I2 92 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 STEAP3Q658P3 488 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 IL1F10Q8WWZ1 152 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 MAFIPQ8WZ33 124 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 ST6GALNAC5Q9BVH7 336 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 MS4A7Q9GZW8 240 aaPredicted RBP15.37■□□□□ 0.05
RAB40C-207ENST00000563109 SCPEP1Q9HB40 452 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 GFOD1Q9NXC2 390 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 JPT1Q9UK76 154 aa15.37■□□□□ 0.05
RAB40C-207ENST00000563109 FAM172BPA6NC97 362 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 TOR1AO14656 332 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 FABP7O15540 132 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 HLA-DQB1P01920 261 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 ARG1P05089 322 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 LPLP06858 475 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 CD34P28906 385 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 TNFSF8P32971 234 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 HTD2P86397 168 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 IL18Q14116 193 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 RUSC1-AS1Q66K80 236 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 HCP5Q6MZN7 132 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 BRD3OSQ6XYD6 125 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 Q6ZS49 121 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 ABHD12Q8N2K0 398 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 OR4A4PQ8NGN8 299 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 OR2S2Q9NQN1 319 aa15.36■□□□□ 0.05
RAB40C-207ENST00000563109 A0A087X0M5 115 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 IGHV3-43A0A0B4J1X8 118 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 A0A1B0GX30 115 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 A0A1W2PRD5 423 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 A0A1W2PRF3 423 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 A0A1W2PRM7 423 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 SULT1C2O00338 296 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 NPFFO15130 113 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 RGS11O94810 467 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 IGHV3-43DP0DP04 118 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 EPHA1P21709 976 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 LGALS4P56470 323 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 PYHIN1Q6K0P9 492 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 OR11H6Q8NGC7 330 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 OR9G1Q8NH87 305 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 ZNF596Q8TC21 504 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 GCDHQ92947 438 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-207ENST00000563109 OCSTAMPQ9BR26 566 aa15.35■□□□□ 0.05
RAB40C-207ENST00000563109 MEIS3P1A6NDR6 274 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 FABP12A6NFH5 140 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 HSPA12AO43301 675 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 CRLF1O75462 422 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 SCTP09683 121 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 GNG10P50151 68 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms