RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
CDH1-204ENST00000562118 TRAV39A0A0B4J263 110 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 MELTFP08582 738 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 FBP1P09467 338 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 OMGP23515 440 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 SERPINB10P48595 397 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 ARL6IP1Q15041 203 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 ZNF260Q3ZCT1 412 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 OLFML2AQ68BL7 652 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 PDZD9Q8IXQ8 264 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 ZNF439Q8NDP4 499 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 OR4K15Q8NH41 348 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 NDNFQ8TB73 568 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 NEK7Q8TDX7 302 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 JMJD8Q96S16 334 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 C12orf4Q9NQ89 552 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 GFOD1Q9NXC2 390 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 SCOCQ9UIL1 159 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 POMT1Q9Y6A1 747 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 DNHD1Q96M86 4753 aa10.88□□□□□ -0.67
CDH1-204ENST00000562118 MEIOCA2RUB1 952 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 DNAJC9-AS1A6NH13 148 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 DIRAS3O95661 229 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 HBZP02008 142 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
CDH1-204ENST00000562118 GSTP1P09211 210 aaKnown RBP10.87□□□□□ -0.67
CDH1-204ENST00000562118 COX7A1P24310 79 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 IER3P46695 156 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 DYNLT3P51808 116 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 ZNF137PP52743 207 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 UBA52P62987 128 aaKnown RBP10.87□□□□□ -0.67
CDH1-204ENST00000562118 SLC9A3R2Q15599 337 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 HLA-DRB5Q30154 266 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 DYNAPQ8N1N2 210 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 ABHD12Q8N2K0 398 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 ARL11Q969Q4 196 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 MALSU1Q96EH3 234 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 HDHD3Q9BSH5 251 aaPredicted RBP10.87□□□□□ -0.67
CDH1-204ENST00000562118 TOLLIPQ9H0E2 274 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 DCSTAMPQ9H295 470 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 Q9N2K0 584 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 ING3Q9NXR8 418 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 TRAPPC2LQ9UL33 140 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 MGAT4AQ9UM21 535 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 CEPT1Q9Y6K0 416 aa10.87□□□□□ -0.67
CDH1-204ENST00000562118 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 J3QR06 171 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 SPCS2Q15005 226 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 UBE2NLQ5JXB2 153 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 HACD4Q5VWC8 232 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 STEAP3Q658P3 488 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 CLVS1Q8IUQ0 354 aaPredicted RBP10.86□□□□□ -0.67
CDH1-204ENST00000562118 OR9G1Q8NH87 305 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 PIFOQ8TCI5 191 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 FAM216AQ8WUB2 273 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 CCDC107Q8WV48 283 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 MMP28Q9H239 520 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 TAF9BQ9HBM6 251 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 JPT1Q9UK76 154 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 PSG11Q9UQ72 335 aa10.86□□□□□ -0.67
CDH1-204ENST00000562118 OOSP1A8MZH6 123 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 H3BMQ9 156 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 BUB1B-PAK6H3BSN5 160 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 ZNF701M0R085 212 aaPredicted RBP10.85□□□□□ -0.67
CDH1-204ENST00000562118 ITGB1BP1O14713 200 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 SPINT2O43291 252 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 ARG1P05089 322 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 FCGR3AP08637 254 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 GNB3P16520 340 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 DTYMKP23919 212 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 RORCP51449 518 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
CDH1-204ENST00000562118 HLA-DRB3P79483 266 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 PNLIPRP3Q17RR3 467 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 SLC25A48Q6ZT89 311 aaKnown RBP10.85□□□□□ -0.67
CDH1-204ENST00000562118 OR1L1Q8NH94 360 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 RFESDQ8TAC1 157 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 DYNC2LI1Q8TCX1 351 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 SSMEM1Q8WWF3 244 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 ST6GALNAC6Q969X2 333 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 CREB3L1Q96BA8 519 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 ISOC1Q96CN7 298 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 CMSS1Q9BQ75 279 aaKnown RBP10.85□□□□□ -0.67
CDH1-204ENST00000562118 CABLES2Q9BTV7 478 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 ATG5Q9H1Y0 275 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
CDH1-204ENST00000562118 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
CDH1-204ENST00000562118 XRCC3O43542 346 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 YPEL1O60688 119 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 ZNF182P17025 639 aaPredicted RBP10.84□□□□□ -0.67
CDH1-204ENST00000562118 HTR1DP28221 377 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 MNDAP41218 407 aa10.84□□□□□ -0.67
CDH1-204ENST00000562118 BAMBIQ13145 260 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms