RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MGMTP16455 207 aa2.53□□□□□ -2
HERC1-215ENST00000561436 CRISP2P16562 243 aa2.53□□□□□ -2
HERC1-215ENST00000561436 RPS4Y1P22090 263 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 GTF2E2P29084 291 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 CLDN8P56748 225 aa2.53□□□□□ -2
HERC1-215ENST00000561436 KLF3P57682 345 aaPredicted RBP2.53□□□□□ -2
HERC1-215ENST00000561436 EMX2Q04743 252 aa2.53□□□□□ -2
HERC1-215ENST00000561436 C1DQ13901 141 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 KIAA0087Q14695 138 aa2.53□□□□□ -2
HERC1-215ENST00000561436 ZNF181Q2M3W8 571 aa2.53□□□□□ -2
HERC1-215ENST00000561436 RFX4Q33E94 735 aa2.53□□□□□ -2
HERC1-215ENST00000561436 SLC36A2Q495M3 483 aa2.53□□□□□ -2
HERC1-215ENST00000561436 ZBED5Q49AG3 693 aa2.53□□□□□ -2
HERC1-215ENST00000561436 LIN52Q52LA3 116 aa2.53□□□□□ -2
HERC1-215ENST00000561436 C1orf140Q5VVS0 124 aa2.53□□□□□ -2
HERC1-215ENST00000561436 CNIH2Q6PI25 160 aa2.53□□□□□ -2
HERC1-215ENST00000561436 IL34Q6ZMJ4 242 aa2.53□□□□□ -2
HERC1-215ENST00000561436 TRMT10CQ7L0Y3 403 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 C6orf120Q7Z4R8 191 aa2.53□□□□□ -2
HERC1-215ENST00000561436 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
HERC1-215ENST00000561436 MDP1Q86V88 176 aa2.53□□□□□ -2
HERC1-215ENST00000561436 LRRC28Q86X40 367 aaPredicted RBP2.53□□□□□ -2
HERC1-215ENST00000561436 WDFY1Q8IWB7 410 aa2.53□□□□□ -2
HERC1-215ENST00000561436 RIMKLAQ8IXN7 391 aa2.53□□□□□ -2
HERC1-215ENST00000561436 C20orf196Q8IYI0 205 aa2.53□□□□□ -2
HERC1-215ENST00000561436 TMEM61Q8N0U2 210 aa2.53□□□□□ -2
HERC1-215ENST00000561436 ZNF283Q8N7M2 679 aa2.53□□□□□ -2
HERC1-215ENST00000561436 DEFB108BQ8NET1 73 aa2.53□□□□□ -2
HERC1-215ENST00000561436 OR8J2Q8NGG1 315 aa2.53□□□□□ -2
HERC1-215ENST00000561436 OR52E2Q8NGJ4 325 aa2.53□□□□□ -2
HERC1-215ENST00000561436 SYNPRQ8TBG9 265 aa2.53□□□□□ -2
HERC1-215ENST00000561436 RAB8BQ92930 207 aa2.53□□□□□ -2
HERC1-215ENST00000561436 MYDGFQ969H8 173 aa2.53□□□□□ -2
HERC1-215ENST00000561436 YIPF5Q969M3 257 aa2.53□□□□□ -2
HERC1-215ENST00000561436 CIDECQ96AQ7 238 aaPredicted RBP2.53□□□□□ -2
HERC1-215ENST00000561436 TESCQ96BS2 214 aa2.53□□□□□ -2
HERC1-215ENST00000561436 ROPN1LQ96C74 230 aa2.53□□□□□ -2
HERC1-215ENST00000561436 NEURL3Q96EH8 262 aa2.53□□□□□ -2
HERC1-215ENST00000561436 CHMP6Q96FZ7 201 aa2.53□□□□□ -2
HERC1-215ENST00000561436 FAM210BQ96KR6 192 aa2.53□□□□□ -2
HERC1-215ENST00000561436 ZNF75AQ96N20 296 aa2.53□□□□□ -2
HERC1-215ENST00000561436 OR7D2Q96RA2 312 aa2.53□□□□□ -2
HERC1-215ENST00000561436 TMEM59Q9BXS4 323 aa2.53□□□□□ -2
HERC1-215ENST00000561436 DPY30Q9C005 99 aa2.53□□□□□ -2
HERC1-215ENST00000561436 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 STX18Q9P2W9 335 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 ZMAT5Q9UDW3 170 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 OR5V1Q9UGF6 321 aa2.53□□□□□ -2
HERC1-215ENST00000561436 SHPKQ9UHJ6 478 aa2.53□□□□□ -2
HERC1-215ENST00000561436 POFUT2Q9Y2G5 429 aa2.53□□□□□ -2
HERC1-215ENST00000561436 POLR3HQ9Y535 204 aaPredicted RBP2.53□□□□□ -2
HERC1-215ENST00000561436 TIMM22Q9Y584 194 aa2.53□□□□□ -2
HERC1-215ENST00000561436 NUP210LQ5VU65 1888 aa2.53□□□□□ -2
HERC1-215ENST00000561436 DIDO1Q9BTC0 2240 aaKnown RBP2.53□□□□□ -2
HERC1-215ENST00000561436 SEC16AO15027 2179 aa2.53□□□□□ -2
HERC1-215ENST00000561436 TMEM72A0PK05 275 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 ZNF726A6NNF4 738 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 FTCDNL1E5RQL4 147 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 RNASEK-C17orf49H0YIS7 233 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 XKRYO14609 159 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 AZIN1O14977 448 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 POLR3GO15318 223 aaPredicted RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 NDUFA2O43678 99 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 SCN2BO60939 215 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 PIAS1O75925 651 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 KRT75O95678 551 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 IGF2P01344 180 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 ZNF735P0CB33 412 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 GKN3PP0CG01 181 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 CD79AP11912 226 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 KITLGP21583 273 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TGFBR2P37173 567 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 GNG11P61952 73 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 HBA1P69905 142 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 EMX1Q04741 257 aaPredicted RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 CKAP4Q07065 602 aaKnown RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 DAZ2Q13117 558 aaKnown RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 PMS2P3Q13401 168 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 OR7A5Q15622 319 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 KCNJ8Q15842 424 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 UAP1Q16222 522 aaPredicted RBP2.52□□□□□ -2.01
HERC1-215ENST00000561436 MAPK14Q16539 360 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TBC1D28Q2M2D7 210 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 CEACAM16Q2WEN9 425 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 ATP6AP1LQ52LC2 224 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TTMPQ5BVD1 217 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 XKR7Q5GH72 579 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 C9orf135Q5VTT2 229 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 C1orf94Q6P1W5 598 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 TMEM53Q6P2H8 277 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 ZGRF1Q86YA3 2104 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 CCNYL1Q8N7R7 359 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 SLC30A7Q8NEW0 376 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 SDR9C7Q8NEX9 313 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 OR2G3Q8NGZ4 309 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 CDC26Q8NHZ8 85 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 SLC38A4Q969I6 547 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 SLC35G5Q96KT7 338 aa2.52□□□□□ -2.01
HERC1-215ENST00000561436 OR2M2Q96R28 347 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms