RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 SEC22CQ9BRL7 303 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 BEX2Q9BXY8 128 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 BEX1Q9HBH7 125 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 CRYBG3Q68DQ2 2970 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 ARID1AO14497 2285 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 A1L4Q6 167 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 HMX3A6NHT5 357 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 SNRPGP15A8MWD9 76 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 ADAM20O43506 726 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 PPYP01298 95 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 HBZP02008 142 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 RLN1P04808 185 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 COX6B1P14854 86 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 RPS2P15880 293 aaKnown RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 NFYAP23511 347 aaPredicted RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 ZBTB25P24278 435 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 ECI1P42126 302 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 SEC61A1P61619 476 aaKnown RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 EDDM3AQ14507 147 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 CARTPTQ16568 116 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 C17orf58Q2M2W7 97 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 TMEM155Q4W5P6 130 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 METTL11BQ5VVY1 283 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 ZNF626Q68DY1 528 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 FAHD2BQ6P2I3 314 aaPredicted RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 ZNF841Q6ZN19 808 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 ADAD2Q8NCV1 583 aaKnown RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 FAHD2AQ96GK7 314 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 RSRP1Q9BUV0 290 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 PARP12Q9H0J9 701 aaKnown RBP9.35□□□□□ -0.91
SNX1-212ENST00000560861 OR51J1Q9H342 316 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 SLC23A1Q9UHI7 598 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 CENPEQ02224 2701 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 ABCA12Q86UK0 2595 aa9.35□□□□□ -0.91
SNX1-212ENST00000560861 IGKV1D-13A0A0B4J2D9 117 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
SNX1-212ENST00000560861 F2RL2O00254 374 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 BET1O15155 118 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 TMPRSS2O15393 492 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 OR4E1P0C645 316 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 IGKV1-13P0DP09 117 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 SSTR5P35346 364 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 UBE2MP61081 183 aaKnown RBP9.34□□□□□ -0.91
SNX1-212ENST00000560861 RRAS2P62070 204 aaPredicted RBP9.34□□□□□ -0.91
SNX1-212ENST00000560861 HTD2P86397 168 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 KCNJ8Q15842 424 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
SNX1-212ENST00000560861 MUC20Q8N307 709 aaPredicted RBP9.34□□□□□ -0.91
SNX1-212ENST00000560861 OR52B4Q8NGK2 314 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 PSMG3-AS1Q96PY0 264 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 KCNIP1Q9NZI2 227 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 OR6C3Q9NZP0 311 aa9.34□□□□□ -0.91
SNX1-212ENST00000560861 SLC25A10Q9UBX3 287 aaPredicted RBP9.34□□□□□ -0.91
SNX1-212ENST00000560861 POLQO75417 2590 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 DVL1O14640 695 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 NDUFB3O43676 98 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 ZNF728P0DKX0 622 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 SULT1A3P0DMM9 295 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 SULT1A4P0DMN0 295 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 PAX1P15863 534 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 GZMHP20718 246 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 DLX6P56179 175 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 EDDM3BP56851 147 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 TMEM33P57088 247 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 LOXL3P58215 753 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 TAS2R31P59538 309 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 SUPT4H1P63272 117 aaKnown RBP9.33□□□□□ -0.92
SNX1-212ENST00000560861 MEF2CQ06413 473 aaPredicted RBP9.33□□□□□ -0.92
SNX1-212ENST00000560861 CD300CQ08708 224 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 BAMBIQ13145 260 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 DHRS2Q13268 280 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 GNMTQ14749 295 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 FCN2Q15485 313 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 AVPI1Q5T686 147 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 CD276Q5ZPR3 534 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 TMED4Q7Z7H5 227 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 LYG2Q86SG7 212 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 OR52L2PQ8NGH6 319 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 ZNF431Q8TF32 576 aaPredicted RBP9.33□□□□□ -0.92
SNX1-212ENST00000560861 RAB1CQ92928 201 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 ARL11Q969Q4 196 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 C19orf12Q9NSK7 152 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 CALYQ9NYX4 217 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 OR2W1Q9Y3N9 320 aa9.33□□□□□ -0.92
SNX1-212ENST00000560861 ABCA2Q9BZC7 2435 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 KBTBD11-OT1A0A1B0GTJ5 212 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 MEX3AA1L020 520 aaKnown RBP9.32□□□□□ -0.92
SNX1-212ENST00000560861 C9orf170A2RU37 121 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
SNX1-212ENST00000560861 WNT2P09544 360 aa9.32□□□□□ -0.92
SNX1-212ENST00000560861 PGAM2P15259 253 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms