RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MUC1P15941 1255 aaPredicted RBP10.78□□□□□ -0.68
SNX1-211ENST00000560829 APOBEC3AP31941 199 aaPredicted RBP10.78□□□□□ -0.68
SNX1-211ENST00000560829 CD80P33681 288 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 GLIPR1P48060 266 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 OPCMLQ14982 345 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 SP6Q3SY56 376 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TBC1D26Q86UD7 250 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 LGI3Q8N145 548 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 BOLLQ8N9W6 283 aaKnown RBP10.78□□□□□ -0.68
SNX1-211ENST00000560829 GALMQ96C23 342 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 AKR1E2Q96JD6 320 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 C18orf12Q96KH6 178 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TP53RKQ96S44 253 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TMEM222Q9H0R3 208 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 RDH8Q9NYR8 311 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TNFSF18Q9UNG2 199 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 MAB21L2Q9Y586 359 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 CADP27708 2225 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 IGHV3OR15-7A0A075B7D8 119 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 PHF1O43189 567 aaPredicted RBP10.78□□□□□ -0.68
SNX1-211ENST00000560829 IFNA21P01568 189 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 IRF2P14316 349 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 S100A11P31949 105 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 LUMP51884 338 aaPredicted RBP10.78□□□□□ -0.68
SNX1-211ENST00000560829 CCL8P80075 99 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 ZNF345Q14585 488 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TEX261Q6UWH6 196 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 ZNF546Q86UE3 836 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 PRR18Q8N4B5 295 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 ZNF561Q8N587 486 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 OR13A1Q8NGR1 328 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TMEM56Q96MV1 263 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TMEM204Q9BSN7 226 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 EGLN1Q9GZT9 426 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 MFFQ9GZY8 342 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 MS4A5Q9H3V2 200 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TMEM56-RWDD3S4R434 201 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 U3KQ87 197 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 TUBAL3A6NHL2 446 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 B9A039 149 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 HSD17B6O14756 317 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 SIAH2O43255 324 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 HSPA12AO43301 675 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 TSC22D2O75157 780 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 PGLYRP1O75594 196 aaPredicted RBP10.77□□□□□ -0.69
SNX1-211ENST00000560829 B3GALNT1O75752 331 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 CYB5R3P00387 301 aaPredicted RBP10.77□□□□□ -0.69
SNX1-211ENST00000560829 HBZP02008 142 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 LYL1P12980 280 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 SNTB1Q13884 538 aaKnown RBP10.77□□□□□ -0.69
SNX1-211ENST00000560829 NDUFA5Q16718 116 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 MST1LQ2TV78 715 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 LRRC37A5PQ49AS3 106 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 GGNBP1Q5YKI7 109 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 TMUB2Q71RG4 321 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 OR1L1Q8NH94 360 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 THAP6Q8TBB0 222 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 NEUROG1Q92886 237 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 DNTTIP1Q9H147 329 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 HEATR1Q9H583 2144 aaKnown RBP10.77□□□□□ -0.69
SNX1-211ENST00000560829 ITGB1BP2Q9UKP3 347 aa10.77□□□□□ -0.69
SNX1-211ENST00000560829 ODAMA1E959 279 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 LRRC30A6NM36 301 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 OR2F2O95006 317 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 GZMHP20718 246 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 UCP1P25874 307 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 LOXP28300 417 aaPredicted RBP10.76□□□□□ -0.69
SNX1-211ENST00000560829 S100GP29377 79 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 IL2RGP31785 369 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 CEACAM6P40199 344 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 P2RX3P56373 397 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 HTD2P86397 168 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 OR2F1Q13607 317 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 FAM201AQ5SY85 155 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ZNF788Q6ZQV5 615 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ZNRF1Q8ND25 227 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 OR5D13Q8NGL4 314 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 LHFPL5Q8TAF8 219 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 MRGPRDQ8TDS7 321 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 RNF126Q9BV68 326 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 SAP30LQ9HAJ7 183 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 FBXO9Q9UK97 447 aaPredicted RBP10.76□□□□□ -0.69
SNX1-211ENST00000560829 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ATRXP46100 2492 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 A0A0D9SG52 128 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 RNF222A6NCQ9 220 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 DEFB108AA8MXU0 73 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 H0Y980 276 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 H0YIZ8 118 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 CDS2O95674 445 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 F2RP25116 425 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 MSMO1Q15800 293 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms