RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LHX4Q969G2 390 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 C7orf50Q9BRJ6 194 aaKnown RBP11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 PRDM13Q9H4Q3 707 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 DIABLOQ9NR28 239 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 A0A0A6YYH2 397 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 A6NJ64 397 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 POM121CA8CG34 1229 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 PDCD6O75340 191 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 PTHLHP12272 177 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 GZMHP20718 246 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 GDNFP39905 211 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 DLX6P56179 175 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 HILS1P60008 231 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 ATXN7L3Q14CW9 347 aaPredicted RBP11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 TMEM30BQ3MIR4 351 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 RSBN1Q5VWQ0 802 aaPredicted RBP11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 RAB12Q6IQ22 244 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 HEPN1Q6WQI6 88 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 FCAMRQ8WWV6 532 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 GCDHQ92947 438 aaPredicted RBP11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 COQ2Q96H96 371 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 ATG5Q9H1Y0 275 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 BANF2Q9H503 90 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 SIRT7Q9NRC8 400 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 RAB22AQ9UL26 194 aa11.45□□□□□ -0.58
PKNOX1-209ENST00000560448 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 A0A0B4J293 547 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 FAM240BA0A1B0GVZ2 78 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 MEIOCA2RUB1 952 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 CCL3L1P16619 93 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 GLIPR1P48060 266 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 UNC119Q13432 240 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 OR10K2Q6IF99 312 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 TCF23Q7RTU1 214 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 RTN4RL2Q86UN3 420 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 PRIMA1Q86XR5 153 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 GAPTQ8N292 157 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 FAM89BQ8N5H3 189 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 NEK7Q8TDX7 302 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 FAM46BQ96A09 425 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 MARVELD1Q9BSK0 173 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 HSF4Q9ULV5 492 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 SETD2Q9BYW2 2564 aaPredicted RBP11.44□□□□□ -0.58
PKNOX1-209ENST00000560448 TRAV18A0A075B6X5 111 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 KBTBD11-OT1A0A1B0GTJ5 212 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 ANKRD20A5PA0PJZ0 165 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 RNASEK-C17orf49H0YIS7 233 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 CLDN34H7C241 214 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 HSPB6O14558 160 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 SCGNO76038 276 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 ARL6IP1Q15041 203 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 PLET1Q6UQ28 207 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 TPRX1Q8N7U7 411 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 OR11H6Q8NGC7 330 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 OR56B1Q8NGI3 324 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 RIMS4Q9H426 269 aaPredicted RBP11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 KLK11Q9UBX7 282 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 MTFP1Q9UDX5 166 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 TBL2Q9Y4P3 447 aaKnown RBP11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 A0A087X0M5 115 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 A0A1B0GX30 115 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 METTL21EPA6NDL7 271 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 CENPXA8MT69 81 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 RAB27BO00194 218 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 NPFFO15130 113 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 FBP1P09467 338 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 CD300CQ08708 224 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 MOGAT2Q3SYC2 334 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 ZNF497Q6ZNH5 498 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 TMEM86BQ8N661 226 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 CREB3L1Q96BA8 519 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 SLC6A7Q99884 636 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 LPAR5Q9H1C0 372 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 HRASLSQ9HDD0 168 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 ETAA1Q9NY74 926 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 KIF25Q9UIL4 384 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 FAM96BQ9Y3D0 163 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 POMT1Q9Y6A1 747 aa11.43□□□□□ -0.58
PKNOX1-209ENST00000560448 NF1P21359 2839 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 BOLA2-SMG1P6H3BVE0 249 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 TRIM77I1YAP6 450 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 SULT1C2O00338 296 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 GSTT2BP0CG30 244 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 CGB3P0DN86 165 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 CGB7P0DN87 165 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 CHATP28329 748 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 CD34P28906 385 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 GLP1RP43220 463 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 LGALS4P56470 323 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 SSBP1Q04837 148 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 AANATQ16613 207 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms