RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 BEX5Q5H9J7 111 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 MEX3BQ6ZN04 569 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 Q6ZS49 121 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 TP53RKQ96S44 253 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 CCL13Q99616 98 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 SAP30LQ9HAJ7 183 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 DYNLRB1Q9NP97 96 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 RNF7Q9UBF6 113 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 ZDHHC8Q9ULC8 765 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 RNF150Q9ULK6 438 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 HCFC1P51610 2035 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 TRBV6-7A0A0A0MS04 114 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 ZNF737O75373 536 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 TNFSF4P23510 183 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 MDH2P40926 338 aaKnown RBP9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 TFF3Q07654 80 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 MST1LQ2TV78 715 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 FAM216BQ8N7L0 139 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 ZNF565Q8N9K5 539 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 OR10V1Q8NGI7 309 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 OR4A4PQ8NGN8 299 aa9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 VRK1Q99986 396 aaPredicted RBP9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.96
SNRPA1-211ENST00000560433 CRYBG3Q68DQ2 2970 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 YLPM1P49750 1951 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 TRBV6-6A0A0A6YYG2 114 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 TMEM30CPA0ZSE6 113 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 GLAP06280 429 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 OR8U9P0C7N5 309 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 FBXL19-AS1Q494R0 122 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 TBC1D26Q86UD7 250 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 SLC38A6Q8IZM9 456 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 OR8U1Q8NH10 309 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 COQ8AQ8NI60 647 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 ANGPTL6Q8NI99 470 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 LHFPL5Q8TAF8 219 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 RSRP1Q9BUV0 290 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 NAA60Q9H7X0 242 aa9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-211ENST00000560433 LY6HO94772 140 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 HBZP02008 142 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 GATA4P43694 442 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 ERVFRD-1P60508 538 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 TESK1Q15569 626 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 SRSF7Q16629 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 UTF1Q5T230 341 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 OR51H1Q8NH63 302 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 GLYATL2Q8WU03 294 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 PCDHB10Q9UN67 800 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 RNF115Q9Y4L5 304 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 USF3Q68DE3 2245 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 TMPRSS2O15393 492 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 TUSC2O75896 110 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 IL2RGP31785 369 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 APOBEC3AP31941 199 aaPredicted RBP9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 PPP1CCP36873 323 aaKnown RBP9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 ECI1P42126 302 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 KCNJ3P48549 501 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 GSG1LQ6UXU4 331 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 H1FOOQ8IZA3 346 aaPredicted RBP9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 OR10Z1Q8NGY1 313 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 ARL11Q969Q4 196 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 RBMXL1Q96E39 390 aaKnown RBP9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 DNTTIP1Q9H147 329 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 KCNIP1Q9NZI2 227 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 KCNS2Q9ULS6 477 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 OR2W1Q9Y3N9 320 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 CSMD1Q96PZ7 3565 aa9.07□□□□□ -0.96
SNRPA1-211ENST00000560433 C19orf84I3L1E1 186 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 IFNL4K9M1U5 179 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 MPPED1O15442 326 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 IRF2P14316 349 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 CFHR2P36980 270 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 LINC00205P59089 165 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 TMEM187Q14656 261 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 SHEQ5VZ18 495 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 SLC35E4Q6ICL7 350 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 MUC15Q8N387 334 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 GALMQ96C23 342 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 CABLES2Q9BTV7 478 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 PAIP2BQ9ULR5 123 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 KCNIP3Q9Y2W7 256 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 C3orf85A0A1B0GTC6 90 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 H7C1Q1 480 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 IGLV2-14P01704 120 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 HEXAP06865 529 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 CTXN2P0C2S0 81 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 ZNF16P17020 682 aaPredicted RBP9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 TNFRSF1AP19438 455 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 HMGN3Q15651 99 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 GGNBP1Q5YKI7 109 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 LEAP2Q969E1 77 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 BBC3Q96PG8 261 aaPredicted RBP9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 OR2S2Q9NQN1 319 aa9.06□□□□□ -0.96
SNRPA1-211ENST00000560433 COMMD9Q9P000 198 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms