RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CRTAPO75718 401 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-214ENST00000560402 RHBDL1O75783 438 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 MPIG6BO95866 241 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 NRASP01111 189 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 MT-ND4P03905 459 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 GSTP1P09211 210 aaKnown RBP11.05□□□□□ -0.64
SMAD3-214ENST00000560402 VSIG8P0DPA2 414 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 GTF2F2P13984 249 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 PTGFRP43088 359 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 RBP2P50120 134 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 FUT6P51993 359 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 MTCP1P56278 107 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 HERPUD1Q15011 391 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 LRRC75BQ2VPJ9 315 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 PLCXD3Q63HM9 321 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 Q6ZTK2 550 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 FAM185AQ8N0U4 392 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 ZNF561Q8N587 486 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 POC1AQ8NBT0 407 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 AQP3Q92482 292 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 METTL9Q9H1A3 318 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 PPA2Q9H2U2 334 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 ELL3Q9HB65 397 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-214ENST00000560402 HRASLSQ9HDD0 168 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 NUDT15Q9NV35 164 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 ING4Q9UNL4 249 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 POLDIP2Q9Y2S7 368 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 MAB21L2Q9Y586 359 aa11.05□□□□□ -0.64
SMAD3-214ENST00000560402 ANGPTL7O43827 346 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 CSTBP04080 98 aaKnown RBP11.04□□□□□ -0.64
SMAD3-214ENST00000560402 H2AFB2P0C5Z0 115 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 TMEM225BP0DP42 221 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 TBPP20226 339 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 CBX5P45973 191 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 OR3A4PP47883 348 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 EIF2B2P49770 351 aaKnown RBP11.04□□□□□ -0.64
SMAD3-214ENST00000560402 DLX1P56177 255 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 GNG2P59768 71 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 PRB3Q04118 309 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-214ENST00000560402 MEF2DQ14814 521 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 PNLIPRP3Q17RR3 467 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 HCP5Q6MZN7 132 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 ZNF782Q6ZMW2 699 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-214ENST00000560402 ACP7Q6ZNF0 438 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 PNKDQ8N490 385 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 TMEM229BQ8NBD8 167 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 ZNRF1Q8ND25 227 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 OR10R2Q8NGX6 335 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 GPX8Q8TED1 209 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 SSX3Q99909 188 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 MEGF9Q9H1U4 602 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 KCNK15Q9H427 330 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 HEXA-AS1Q9H8Q6 139 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 GPR173Q9NS66 373 aa11.04□□□□□ -0.64
SMAD3-214ENST00000560402 IGKV1-9A0A0C4DH69 117 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 H3BUI4 141 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 J3QT63 122 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 TFF1P04155 84 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 KIR2DS4P43632 304 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 QRFPP83859 136 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 PLA2G7Q13093 441 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 RSU1Q15404 277 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 RBMS2Q15434 407 aaKnown RBP11.03□□□□□ -0.64
SMAD3-214ENST00000560402 UBE2V2Q15819 145 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 SLC22A6Q4U2R8 563 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 ACTBL2Q562R1 376 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 TMEM42Q69YG0 159 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 HAGHLQ6PII5 290 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-214ENST00000560402 MOB3CQ70IA8 216 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 DRAXINQ8NBI3 349 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-214ENST00000560402 OR2T6Q8NHC8 308 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 RAB3CQ96E17 227 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 SPACA5Q96QH8 159 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 GPN1Q9HCN4 374 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-214ENST00000560402 ING3Q9NXR8 418 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 KLK11Q9UBX7 282 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 ALG5Q9Y673 324 aa11.03□□□□□ -0.64
SMAD3-214ENST00000560402 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.64
SMAD3-214ENST00000560402 TRAV6A0A075B6T7 132 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 FAM230AA0A1W2PPH8 454 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-214ENST00000560402 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 BOLA2-SMG1P6H3BVE0 249 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 NOS1APO75052 506 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-214ENST00000560402 PEX14O75381 377 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 PGA5P0DJD9 388 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 BTCP35070 178 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 VEGFCP49767 419 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 RPL31P62899 125 aaKnown RBP11.02□□□□□ -0.65
SMAD3-214ENST00000560402 RPS27AP62979 156 aaKnown RBP11.02□□□□□ -0.65
SMAD3-214ENST00000560402 UNC119Q13432 240 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 CDNFQ49AH0 187 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 OR10K2Q6IF99 312 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 STEAP1BQ6NZ63 245 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 CALHM1Q8IU99 346 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms