RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 POLR2GP62487 172 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 VDAC1P21796 283 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 KRTDAPP60985 99 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 ST3GAL2Q16842 350 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 DUSP18Q8NEJ0 188 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 OR1L8Q8NGR8 309 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 OR1L1Q8NH94 360 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 PRNDQ9UKY0 176 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 LIPGQ9Y5X9 500 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 RAB29O14966 203 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 GSTZ1O43708 216 aaPredicted RBP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 MMP7P09237 267 aaPredicted RBP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 ERGP11308 486 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 MGAT2Q10469 447 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 ZBTB44Q8NCP5 570 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ATP5SQ99766 215 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 K7N7A8 449 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 SYNGR1O43759 233 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 CD40P25942 277 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ATP5J2P56134 94 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 OR2W1Q9Y3N9 320 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 A0A1W2PQM1 296 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 MPC2O95563 127 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 REG1BP48304 166 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ZP4Q12836 540 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 FDCSPQ8NFU4 85 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 LURAP1Q96LR2 239 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 WDFY2Q96P53 400 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ZDHHC8Q9ULC8 765 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 RD3LP0DJH9 198 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 TAS2R60P59551 318 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 COL10A1Q03692 680 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 CDCP2Q5VXM1 449 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 GAPTQ8N292 157 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 RNF115Q9Y4L5 304 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
TRAF3-208ENST00000560371 FAM24AA6NFZ4 105 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 TGOLN2O43493 480 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 CLDN14O95500 239 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 OR10G9Q8NGN4 311 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 OR10G7Q8NGN6 311 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 SYNGR2O43760 224 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 ZNF737O75373 536 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 UBE2L3P68036 154 aaKnown RBP11.74□□□□□ -0.53
TRAF3-208ENST00000560371 PSG4Q00888 419 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 FAM219AQ8IW50 185 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 WIPI2Q9Y4P8 454 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
TRAF3-208ENST00000560371 A0A0U1RQV5 110 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 MAP1LC3B2A6NCE7 125 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 MAP1LC3BQ9GZQ8 125 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 RABAC1Q9UI14 185 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 CTSDP07339 412 aaPredicted RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 DYNLT3P51808 116 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 RPL30P62888 115 aaKnown RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 KLRB1Q12918 225 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 NXF2Q9GZY0 626 aaKnown RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 PRSS50Q9UI38 385 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 TO15178 435 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 GUK1Q16774 197 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 RBPMS2Q6ZRY4 209 aaKnown RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 COMMD1Q8N668 190 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 NFAM1Q8NET5 270 aaPredicted RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 ZNF429Q86V71 674 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 RNF2Q99496 336 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 FNDC1Q4ZHG4 1894 aaPredicted RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 TRAV39A0A0B4J263 110 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 SLC35B1P78383 322 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 ZNF658BQ4V348 819 aaPredicted RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 TMEM18Q96B42 140 aa11.73□□□□□ -0.53
TRAF3-208ENST00000560371 ADAT3Q96EY9 351 aaPredicted RBP11.73□□□□□ -0.53
TRAF3-208ENST00000560371 TRBV5-3A0A0A0MS03 114 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 CHST1O43916 411 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 INPP5JQ15735 1006 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-208ENST00000560371 ZBTB34Q8NCN2 500 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 PGLYRP3Q96LB9 341 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 VSIG4Q9Y279 399 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 HEATR5AQ86XA9 2040 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 ANKRD20A5PA0PJZ0 165 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 OR10A7Q8NGE5 316 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 CCL13Q99616 98 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 PIMREGQ9BSJ6 248 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 IL17BQ9UHF5 180 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 SIPA1L1O43166 1804 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
TRAF3-208ENST00000560371 FAM106CPP0CH98 169 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms