RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 DPH5Q9H2P9 285 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 OR51I1Q9H343 314 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 SLC25A19Q9HC21 320 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 RETNQ9HD89 108 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 UFSP2Q9NUQ7 469 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 C1orf123Q9NWV4 160 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 LGALS13Q9UHV8 139 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 ATPIF1Q9UII2 106 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 TP53TG1Q9Y2A0 90 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 NDUFAF1Q9Y375 327 aa2.07□□□□□ -2.08
LRRC28-218ENST00000560236 C17orf98A8MV24 154 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 TMEM114B3SHH9 223 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 C11orf94C9JXX5 98 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 E7ESA3 106 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 I3L521 148 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 LGALS9O00182 355 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 CFLARO15519 480 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 RNF13O43567 381 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 SUPT7LO94864 414 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ATP6V1G2O95670 118 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 BGLAPP02818 100 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ABHD2P08910 425 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 P0C879 139 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 GKN3PP0CG01 181 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 OR5H8P0DN80 308 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 HTR1DP28221 377 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 BMI1P35226 326 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ERFP50548 548 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 MNAT1P51948 309 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ESRRGP62508 458 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 MRPS25P82663 173 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 BNIP1Q12981 228 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 PPP1R7Q15435 360 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 OR8G1Q15617 311 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 SGCAQ16586 387 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 LIN52Q52LA3 116 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 FAM219BQ5XKK7 198 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 STUMQ69YW2 141 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 NANOGP8Q6NSW7 305 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ULK3Q6PHR2 472 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 TRMT10CQ7L0Y3 403 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 SLC35E3Q7Z769 313 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 CMC1Q7Z7K0 106 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 LRRC34Q8IZ02 419 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF645Q8N7E2 425 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 FAM216BQ8N7L0 139 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 BHLHE23Q8NDY6 225 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 FBXO36Q8NEA4 188 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 NOXO1Q8NFA2 376 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 BEST4Q8NFU0 473 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 OR10Z1Q8NGY1 313 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF671Q8TAW3 534 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 FBXO25Q8TCJ0 367 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 SPRYD4Q8WW59 207 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 IFT81Q8WYA0 676 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 RGP1Q92546 391 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 MAGOHBQ96A72 148 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 CREB3L1Q96BA8 519 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 RBP7Q96R05 134 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 MRPL57Q9BQC6 102 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 MRPL13Q9BYD1 178 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ROPN1BQ9BZX4 212 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 SLC38A1Q9H2H9 487 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 TXNIPQ9H3M7 391 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 Q9HAA7 133 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ROPN1Q9HAT0 212 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 PLEKHA1Q9HB21 404 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 CACYBPQ9HB71 228 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 ADGRL4Q9HBW9 690 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 BATF3Q9NR55 127 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 C1orf109Q9NX04 203 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 PTTG3PQ9NZH4 202 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 CALML5Q9NZT1 146 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 MRM2Q9UI43 246 aaKnown RBP2.06□□□□□ -2.08
LRRC28-218ENST00000560236 APLNQ9ULZ1 77 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 HHLA2Q9UM44 414 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 IFT52Q9Y366 437 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 LRRC42Q9Y546 428 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 WSB1Q9Y6I7 421 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 COMMD3-BMI1R4GMX3 469 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 HSPE1-MOB4S4R3N1 261 aa2.06□□□□□ -2.08
LRRC28-218ENST00000560236 IGHV3OR15-7A0A075B7D8 119 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 IGHV3-64DA0A0J9YX35 117 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 RNF103-CHMP3A0A140T963 221 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 A0A1W2PRG6 482 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF320A2RRD8 509 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 SMIM30A4D0T7 59 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 C5orf51A6NDU8 294 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 OR6C6A6NF89 314 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FAM159BA6NKW6 160 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LEUTXA8MZ59 168 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 OOSP1A8MZH6 123 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 C11orf98E9PRG8 122 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LINC01619G3V211 115 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 RIPK2O43353 540 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 SGCEO43556 437 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FMO6PO60774 539 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 PEX11AO75192 247 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 IFNA14P01570 189 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 IGHG4P01861 327 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms