RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 LINC00574Q9H8X3 128 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 ZNRD1Q9P1U0 126 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 POMT1Q9Y6A1 747 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 IGHV2-26A0A0B4J1V2 119 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 TRAV39A0A0B4J263 110 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 KBTBD11-OT1A0A1B0GTJ5 212 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 HPGDSO60760 199 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 PDCD6O75340 191 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 PAHP00439 452 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 IGHV4-59P01825 116 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 GLAP06280 429 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 FUT3P21217 361 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 OMGP23515 440 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 IER3P46695 156 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 ACTG1P63261 375 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 MRPS10P82664 201 aaKnown RBP7.6□□□□□ -1.19
LDLR-211ENST00000560173 IL18Q14116 193 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 OXA1LQ15070 435 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 FAM189A2Q15884 450 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 UBE2NLQ5JXB2 153 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 PYHIN1Q6K0P9 492 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 ZNF497Q6ZNH5 498 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 OR2W3Q7Z3T1 314 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 LYSMD2Q8IV50 215 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 GAPTQ8N292 157 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 CENPSQ8N2Z9 138 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 SAMD12Q8N8I0 201 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 ZNF565Q8N9K5 539 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 POC5Q8NA72 575 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 BEND2Q8NDZ0 799 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 KCNG3Q8TAE7 436 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 CYYR1Q96J86 154 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 SOSTQ9BQB4 213 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 TM2D1Q9BX74 207 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 CHIAQ9BZP6 476 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 SRRQ9GZT4 340 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 MIXL1Q9H2W2 232 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 CALYQ9NYX4 217 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 FBLN5Q9UBX5 448 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 TBL2Q9Y4P3 447 aaKnown RBP7.6□□□□□ -1.19
LDLR-211ENST00000560173 V9GYH0 126 aa7.6□□□□□ -1.19
LDLR-211ENST00000560173 A0A087X0M5 115 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 A0A0A6YYD4 124 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 A0A1B0GX30 115 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 MCRIP1C9JLW8 97 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 NPIPB11E5RHQ5 1161 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 H3BUI4 141 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 LDLRAD4O15165 306 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 MT-ND4P03905 459 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 ARG1P05089 322 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 SLC2A2P11168 524 aaPredicted RBP7.59□□□□□ -1.19
LDLR-211ENST00000560173 ARSBP15848 533 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 CHATP28329 748 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 CD34P28906 385 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 SSTR5P35346 364 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 LGALS4P56470 323 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 CLDN12P56749 244 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 OR10A3P58181 314 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 RBM39Q14498 530 aaKnown RBP7.59□□□□□ -1.19
LDLR-211ENST00000560173 UTF1Q5T230 341 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 HES5Q5TA89 166 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 STEAP3Q658P3 488 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 OR52W1Q6IF63 320 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 MZT2BQ6NZ67 158 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 LHFPL4Q7Z7J7 247 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 NR2C2APQ86WQ0 139 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 MRGPRDQ8TDS7 321 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 NEK7Q8TDX7 302 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 FAM3DQ96BQ1 224 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 S100A16Q96FQ6 103 aaKnown RBP7.59□□□□□ -1.19
LDLR-211ENST00000560173 KIRREL1Q96J84 757 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 NICN1Q9BSH3 213 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 CLEC7AQ9BXN2 247 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 LPAR5Q9H1C0 372 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 MEGF9Q9H1U4 602 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 ZNF286AQ9HBT8 521 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 TNFRSF19Q9NS68 423 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 ETAA1Q9NY74 926 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 EXTL2Q9UBQ6 330 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 STEAP1Q9UHE8 339 aa7.59□□□□□ -1.19
LDLR-211ENST00000560173 UBE2QL1A1L167 161 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 TMEM89A2RUT3 159 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 SMIM30A4D0T7 59 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 FAM172BPA6NC97 362 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 C15orf65H3BRN8 121 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 CTDSPLO15194 276 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 GPR137BO60478 399 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 CA11O75493 328 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 SCGNO76038 276 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 HKR1P10072 659 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 IL7P13232 177 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 ELK1P19419 428 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 PAX6P26367 422 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 COMPP49747 757 aaPredicted RBP7.58□□□□□ -1.2
LDLR-211ENST00000560173 ASAH1Q13510 395 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 AANATQ16613 207 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 NKAPLQ5M9Q1 402 aa7.58□□□□□ -1.2
LDLR-211ENST00000560173 MINOS1Q5TGZ0 78 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms