RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 SYT6Q5T7P8 510 aaPredicted RBP9.97□□□□□ -0.81
SNX1-209ENST00000559961 DMKNQ6E0U4 476 aaPredicted RBP9.97□□□□□ -0.81
SNX1-209ENST00000559961 XAF1Q6GPH4 301 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 RAB12Q6IQ22 244 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 ZNF497Q6ZNH5 498 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 NKAIN3Q8N8D7 197 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 KLHL30-AS1Q8NEE0 82 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 MUL1Q969V5 352 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 EAF1Q96JC9 268 aaPredicted RBP9.97□□□□□ -0.81
SNX1-209ENST00000559961 NOL4LQ96MY1 436 aaPredicted RBP9.97□□□□□ -0.81
SNX1-209ENST00000559961 SELENOIQ9C0D9 397 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 CST11Q9H112 138 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 LIN7CQ9NUP9 197 aaKnown RBP9.97□□□□□ -0.81
SNX1-209ENST00000559961 GHRLQ9UBU3 117 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 LRRC42Q9Y546 428 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 IGHV3-43A0A0B4J1X8 118 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 TRBV5-5A0A0J9YX44 114 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 PNMA8CA0A1B0GUJ8 204 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 A0A1W2PPK0 400 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 FAM90A10PA6NDY2 464 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 FAM90A7PA6NKC0 464 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 FAM90A23PA8MXZ1 464 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 IGHG2P01859 326 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 GLAP06280 429 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 OR5H8P0DN80 308 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 IGHV3-43DP0DP04 118 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 CELP19835 753 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 FSTP19883 344 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 FUT3P21217 361 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 VDAC1P21796 283 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 STEAP3Q658P3 488 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 C10orf99Q6UWK7 81 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 OR2W3Q7Z3T1 314 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 ZNF695Q8IW36 515 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 IZUMO1Q8IYV9 350 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 STPG2Q8N412 459 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 RTN4IP1Q8WWV3 396 aaPredicted RBP9.96□□□□□ -0.82
SNX1-209ENST00000559961 GGHQ92820 318 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 NEDD4LQ96PU5 975 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 OR14A2Q96R54 314 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 OR2S2Q9NQN1 319 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNX1-209ENST00000559961 CNOT2Q9NZN8 540 aaKnown RBP9.96□□□□□ -0.82
SNX1-209ENST00000559961 ABRACLQ9P1F3 81 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 CLEC2DQ9UHP7 191 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 LINC00527Q9UJ94 153 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 CMYA5Q8N3K9 4069 aa9.96□□□□□ -0.82
SNX1-209ENST00000559961 UBBP0CG47 229 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 MGMTP16455 207 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 IGFBP3P17936 291 aaPredicted RBP9.95□□□□□ -0.82
SNX1-209ENST00000559961 SOX6P35712 828 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 GPR50Q13585 617 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 EBI3Q14213 229 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 DIAPH2-AS1Q14236 149 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 UTF1Q5T230 341 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 TMEM65Q6PI78 240 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 MRPL41Q8IXM3 137 aaKnown RBP9.95□□□□□ -0.82
SNX1-209ENST00000559961 LINC00482Q8N8I6 264 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 ZFP41Q8N8Y5 198 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 OR10V1Q8NGI7 309 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 OR13C5Q8NGS8 318 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 OR4K15Q8NH41 348 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 UBALD1Q8TB05 177 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 ORAI1Q96D31 301 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 UQCC2Q9BRT2 126 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 ABCG5Q9H222 651 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 SIRT4Q9Y6E7 314 aaPredicted RBP9.95□□□□□ -0.82
SNX1-209ENST00000559961 TGP01266 2768 aa9.95□□□□□ -0.82
SNX1-209ENST00000559961 UBE2QL1A1L167 161 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 C12orf77C9JDV5 145 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 C15orf65H3BRN8 121 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 HBZP02008 142 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 ELANEP08246 267 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 RANBP1P43487 201 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 GPR12P47775 334 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 THBS3P49746 956 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 WNT4P56705 351 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 CD69Q07108 199 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 GLT8D1Q68CQ7 371 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 SLC25A48Q6ZT89 311 aaKnown RBP9.94□□□□□ -0.82
SNX1-209ENST00000559961 C8orf86Q6ZUL3 223 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 ZNF554Q86TJ5 538 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 MS4A15Q8N5U1 240 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 BPIFB6Q8NFQ5 453 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 OR8U1Q8NH10 309 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 TFAP2CQ92754 450 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 S1PR3Q99500 378 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 CHCHD6Q9BRQ6 235 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 BANF2Q9H503 90 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 TAF9BQ9HBM6 251 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 PLXNB1O43157 2135 aa9.94□□□□□ -0.82
SNX1-209ENST00000559961 TRAV8-7A0A075B6U6 113 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 TRBV5-7A0A0A0MS05 114 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 A0A1W2PP11 408 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 CCL24O00175 119 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 RAMP3O60896 148 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 CD1AP06126 327 aa9.93□□□□□ -0.82
SNX1-209ENST00000559961 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
SNX1-209ENST00000559961 FOXE3Q13461 319 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms