RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ZNF880Q6PDB4 577 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 HEPN1Q6WQI6 88 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 Q8N7P7 452 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 GALMQ96C23 342 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 OCSTAMPQ9BR26 566 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 SUCNR1Q9BXA5 334 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 TMPRSS13Q9BYE2 586 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 HEXA-AS1Q9H8Q6 139 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 SCPEP1Q9HB40 452 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 ZNF286AQ9HBT8 521 aa11.77□□□□□ -0.53
SMAD6-204ENST00000559931 MBNL3Q9NUK0 354 aaKnown RBP11.77□□□□□ -0.53
SMAD6-204ENST00000559931 SDCBPO00560 298 aaPredicted RBP11.76□□□□□ -0.53
SMAD6-204ENST00000559931 MMP23AO75900 390 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 RBP4P02753 201 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 SCTP09683 121 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV1-8P0DP01 117 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 PRTN3P24158 256 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 COX7A1P24310 79 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 DLX1P56177 255 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 HLA-DRB3P79483 266 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 LSAMPQ13449 338 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 ZNF554Q86TJ5 538 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 CCDC190Q86UF4 302 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 PDZD9Q8IXQ8 264 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 GVQW1Q8N7I0 195 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 LHX4Q969G2 390 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 TBX15Q96SF7 602 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 GNG12Q9UBI6 72 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 SESN1Q9Y6P5 492 aa11.76□□□□□ -0.53
SMAD6-204ENST00000559931 HIVEP2P31629 2446 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV3-43A0A0B4J1X8 118 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 FAM172BPA6NC97 362 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 C15orf65H3BRN8 121 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 SULT1C2O00338 296 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 FABP7O15540 132 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 HSPA12AO43301 675 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 RBBP9O75884 186 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 AVPP01185 164 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 GSTT2P0CG29 244 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 GSTT2BP0CG30 244 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV3-43DP0DP04 118 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 FPR2P25090 351 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 ARPC4P59998 168 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 MRPS10P82664 201 aaKnown RBP11.75□□□□□ -0.53
SMAD6-204ENST00000559931 HMGN3Q15651 99 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 NCR3LG1Q68D85 454 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 Q6ZPA2 131 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 BEST4Q8NFU0 473 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 OR10A7Q8NGE5 316 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 OR13D1Q8NGV5 346 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 OR52I2Q8NH67 350 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 GPX8Q8TED1 209 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 OR2S2Q9NQN1 319 aa11.75□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV3OR16-10A0A075B7F0 116 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 A0A1W2PRD5 423 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 A0A1W2PRF3 423 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 A0A1W2PRM7 423 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 GABARAPH6UMI1 98 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 TOR1AO14656 332 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 BET1O15155 118 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 IGHV3-7P01780 117 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 MMP9P14780 707 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 HNF1AP20823 631 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
SMAD6-204ENST00000559931 GDNFP39905 211 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 DGCR2P98153 550 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 KLRD1Q13241 179 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 SRSF7Q16629 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMAD6-204ENST00000559931 FAM120AOSQ5T036 256 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 PNKDQ8N490 385 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 OR10V1Q8NGI7 309 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 OR4A4PQ8NGN8 299 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 UPRTQ96BW1 309 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 TMEM133Q9H2Q1 129 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 SLC23A1Q9UHI7 598 aa11.74□□□□□ -0.53
SMAD6-204ENST00000559931 ANK3Q12955 4377 aaKnown RBP11.74□□□□□ -0.53
SMAD6-204ENST00000559931 IGKV1D-8A0A087WSZ0 117 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 F2RL2O00254 374 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 ZBTB25P24278 435 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 PTBP1P26599 531 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMAD6-204ENST00000559931 CEACAM6P40199 344 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 ETV6P41212 452 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 OR3A3P47888 321 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 PRRX1P54821 245 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 ZNF45Q02386 682 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 IGSF11Q5DX21 431 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 GPR157Q5UAW9 335 aa11.73□□□□□ -0.53
SMAD6-204ENST00000559931 IL17RELQ6ZVW7 336 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms