RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 FCGR3AP08637 254 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 OMGP23515 440 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 DTYMKP23919 212 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 NFYBP25208 207 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 S100A5P33763 92 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 CBX5P45973 191 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 PRRX1P54821 245 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 TAS2R20P59543 309 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 HMGN3Q15651 99 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 ZNF260Q3ZCT1 412 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 MIDNQ504T8 468 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 KLF17Q5JT82 389 aaPredicted RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 STEAP3Q658P3 488 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 ZNF880Q6PDB4 577 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 BAIAP2L2Q6UXY1 529 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 C1orf229Q6ZS94 237 aaPredicted RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 PDZD9Q8IXQ8 264 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 C11orf42Q8N5U0 333 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 OR9G1Q8NH87 305 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 ZNF596Q8TC21 504 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 ZNF418Q8TF45 676 aaPredicted RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 TNFRSF14Q92956 283 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 DCUN1D5Q9BTE7 237 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 SUCNR1Q9BXA5 334 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 AUNIPQ9H7T9 357 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 ZMAT3Q9HA38 289 aaKnown RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 ZNF286AQ9HBT8 521 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 Q9N2K0 584 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 EXTL2Q9UBQ6 330 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 FAM96BQ9Y3D0 163 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 TBL2Q9Y4P3 447 aaKnown RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 A3GALT2U3KPV4 340 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 TRAV39A0A0B4J263 110 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 MEIOCA2RUB1 952 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 C15orf65H3BRN8 121 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 HSPA12AO43301 675 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 DIRAS3O95661 229 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 ARG1P05089 322 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 FBP1P09467 338 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 CGB3P0DN86 165 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 CGB7P0DN87 165 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 RCC1P18754 421 aaPredicted RBP8.23□□□□□ -1.09
USP3-216ENST00000559873 ELK1P19419 428 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 CD34P28906 385 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 CEACAM3P40198 252 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 ARHGDIBP52566 201 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 HTD2P86397 168 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 KLRD1Q13241 179 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 SRSF7Q16629 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
USP3-216ENST00000559873 LTC4SQ16873 150 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 OLFML2AQ68BL7 652 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 ZNF626Q68DY1 528 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 BRD3OSQ6XYD6 125 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 LURAP1LQ8IV03 231 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 ABHD12Q8N2K0 398 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 BEND2Q8NDZ0 799 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 OR4A4PQ8NGN8 299 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 RFESDQ8TAC1 157 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 NUDCD2Q8WVJ2 157 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 IL1F10Q8WWZ1 152 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 JMJD8Q96S16 334 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 HDHD3Q9BSH5 251 aaPredicted RBP8.23□□□□□ -1.09
USP3-216ENST00000559873 SLIRPQ9GZT3 109 aaKnown RBP8.23□□□□□ -1.09
USP3-216ENST00000559873 MMP27Q9H306 513 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 OR2S2Q9NQN1 319 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 GFOD1Q9NXC2 390 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 KCNK7Q9Y2U2 307 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
USP3-216ENST00000559873 SVEP1Q4LDE5 3571 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 KIAA2026Q5HYC2 2103 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
USP3-216ENST00000559873 ODF3BA8MYP8 253 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 TRDCB7Z8K6 153 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 FABP7O15540 132 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 MELTFP08582 738 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 ZBTB25P24278 435 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 IL3RAP26951 378 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 PRSS3P35030 304 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 SAA4P35542 130 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 MINOS1Q5TGZ0 78 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 RUSC1-AS1Q66K80 236 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 Q6ZS49 121 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 LAX1Q8IWV1 398 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 IZUMO1Q8IYV9 350 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 C8orf31Q8N9H6 132 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 OR1L1Q8NH94 360 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 EDARADDQ8WWZ3 215 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 ZDHHC16Q969W1 377 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 NXF2Q9GZY0 626 aaKnown RBP8.22□□□□□ -1.09
USP3-216ENST00000559873 OCEL1Q9H607 264 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 SCPEP1Q9HB40 452 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 IFT46Q9NQC8 304 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 ZNF69Q9UC07 566 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 MRPS7Q9Y2R9 242 aaKnown RBP8.22□□□□□ -1.09
USP3-216ENST00000559873 MINOS1-NBL1R4GNA1 71 aa8.22□□□□□ -1.09
USP3-216ENST00000559873 C2CD3Q4AC94 2353 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms