RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PLPPR1Q8TBJ4 325 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 RHOVQ96L33 236 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 APOL4Q9BPW4 351 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 FAM103A1Q9BTL3 118 aaKnown RBP8.9□□□□□ -0.98
SMAD3-206ENST00000558739 MROQ9BYG7 248 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 PLEKHA1Q9HB21 404 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 ZNF581Q9P0T4 197 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 OR52A1Q9UKL2 312 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 IKZF2Q9UKS7 526 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 FAT1Q14517 4588 aa8.9□□□□□ -0.99
SMAD3-206ENST00000558739 DHRS7CA6NNS2 312 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF785A8K8V0 405 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 H3BN98 237 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 EDN2P20800 178 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 SLC2A5P22732 501 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 RIDAP52758 137 aaKnown RBP8.89□□□□□ -0.99
SMAD3-206ENST00000558739 RPS7P62081 194 aaKnown RBP8.89□□□□□ -0.99
SMAD3-206ENST00000558739 GINS1Q14691 196 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 FAHD1Q6P587 224 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 CPOQ8IVL8 374 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF679Q8IYX0 411 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 MAPKAPK5-AS1Q8N8E1 139 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 DNAJC9Q8WXX5 260 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 SLC23A1Q9UHI7 598 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 MRM2Q9UI43 246 aaKnown RBP8.89□□□□□ -0.99
SMAD3-206ENST00000558739 GAB2Q9UQC2 676 aa8.89□□□□□ -0.99
SMAD3-206ENST00000558739 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-206ENST00000558739 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 E2F6O75461 281 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 DAPP51397 102 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 MECP2P51608 486 aaKnown RBP8.88□□□□□ -0.99
SMAD3-206ENST00000558739 ACTBP60709 375 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 PDZK1IP1Q13113 114 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 LSAMPQ13449 338 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 ATP6AP1Q15904 470 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 C5orf64Q2M2E5 130 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 RSBN1Q5VWQ0 802 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-206ENST00000558739 DEGS2Q6QHC5 323 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF565Q8N9K5 539 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF556Q9HAH1 456 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 R4GMQ9 66 aa8.88□□□□□ -0.99
SMAD3-206ENST00000558739 CCDC182A6NF36 153 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 H0YJX3 145 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 DEGS1O15121 323 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 PRODHO43272 600 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 GATBO75879 557 aaKnown RBP8.87□□□□□ -0.99
SMAD3-206ENST00000558739 KDM4BO94953 1096 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 HMGN1P05114 100 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 C21orf33P30042 268 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-206ENST00000558739 RBP2P50120 134 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 ALDH3A2P51648 485 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF134P52741 427 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 CRIP2P52943 208 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-206ENST00000558739 CRISP1P54107 249 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 MTCP1P56278 107 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 PAN3Q58A45 887 aaKnown RBP8.87□□□□□ -0.99
SMAD3-206ENST00000558739 LINC00311Q8N616 119 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 ADAT3Q96EY9 351 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-206ENST00000558739 GGTLC1Q9BX51 225 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 SLC2A8Q9NY64 477 aa8.87□□□□□ -0.99
SMAD3-206ENST00000558739 CNOT2Q9NZN8 540 aaKnown RBP8.87□□□□□ -0.99
SMAD3-206ENST00000558739 C15orf65H3BRN8 121 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 SDCBPO00560 298 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-206ENST00000558739 FCN1O00602 326 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 NBR2O15453 112 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF254O75437 659 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 CYB5AP00167 134 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 TRGV3P03979 118 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 ZP3P21754 424 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 CX3CL1P78423 397 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 EFNB1P98172 346 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF45Q02386 682 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 APOFQ13790 326 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 ACTBL2Q562R1 376 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 SLC35D3Q5M8T2 416 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 C1orf146Q5VVC0 180 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 KDM4DQ6B0I6 523 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 CHST4Q8NCG5 386 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 ABHD5Q8WTS1 349 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 WDR89Q96FK6 387 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-206ENST00000558739 YIPF3Q9GZM5 350 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 GABARAPL1Q9H0R8 117 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 MOB1AQ9H8S9 216 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 RANGRFQ9HD47 186 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-206ENST00000558739 KRT84Q9NSB2 600 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 AP4S1Q9Y587 144 aa8.86□□□□□ -0.99
SMAD3-206ENST00000558739 SYT7O43581 403 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 RPP14O95059 124 aaKnown RBP8.85□□□□□ -0.99
SMAD3-206ENST00000558739 NDUFB8O95169 186 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF137PP52743 207 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 ATP1B3P54709 279 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 NANOS2P60321 138 aaKnown RBP8.85□□□□□ -0.99
SMAD3-206ENST00000558739 PTGES3Q15185 160 aaKnown RBP8.85□□□□□ -0.99
SMAD3-206ENST00000558739 GUCA2BQ16661 112 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 TMEM236Q5W0B7 351 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 LIN54Q6MZP7 749 aa8.85□□□□□ -0.99
SMAD3-206ENST00000558739 ZNF322Q6U7Q0 402 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms