RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 DIAPH2-AS1Q14236 149 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 EDDM3AQ14507 147 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 IRF3Q14653 427 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 KISS1Q15726 138 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 LY6EQ16553 131 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 TAF9Q16594 264 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 C17orf58Q2M2W7 97 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 PIGYQ3MUY2 71 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 LRRC10Q5BKY1 277 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 ARMCX4Q5H9R4 360 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 FIP1L1Q6UN15 594 aaKnown RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 BTNL3Q6UXE8 466 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CCBE1Q6UXH8 406 aaPredicted RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 UNQ9370/PRO34162Q6UXP9 181 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 TMEM91Q6ZNR0 172 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 SLC36A1Q7Z2H8 476 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 ZNF573Q86YE8 665 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 FOXRED2Q8IWF2 684 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 FAM58AQ8N1B3 248 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 SYS1Q8N2H4 156 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 KIR3DL3Q8N743 410 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 RFESDQ8TAC1 157 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 C8orf46Q8TAG6 207 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 PLPPR1Q8TBJ4 325 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 DYRK2Q92630 601 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 LEAP2Q969E1 77 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 TMEM203Q969S6 136 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 BORCS8Q96FH0 119 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 COQ2Q96H96 371 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CEP19Q96LK0 163 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 Q96MT0 163 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 OPALINQ96PE5 141 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 PRRG3Q9BZD7 231 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 PKIBQ9C010 78 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 HMG20AQ9NP66 347 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 PLCXD1Q9NUJ7 323 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 ENOPH1Q9UHY7 261 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 HHLA2Q9UM44 414 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 DIMT1Q9UNQ2 313 aaKnown RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 SLC7A11Q9UPY5 501 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 LSM2Q9Y333 95 aaKnown RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 CAB39Q9Y376 341 aaPredicted RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 PCDHGB1Q9Y5G3 927 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 WNK1Q9H4A3 2382 aa3.4□□□□□ -1.86
SPG11-211ENST00000558561 PLXNB1O43157 2135 aa3.4□□□□□ -1.86
SPG11-211ENST00000558561 A0A1W2PPE3 182 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 A0A1W2PQ09 198 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 MEIOCA2RUB1 952 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 C17orf98A8MV24 154 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 H0YAE9 185 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 SLC1A7O00341 560 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 NPFFO15130 113 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 MPZL2O60487 215 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 KDM4BO94953 1096 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 ATP6V1G2O95670 118 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 HAND1O96004 215 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 SERPINA3P01011 423 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 MAS1P04201 325 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 CDK1P06493 297 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 LIPFP07098 398 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 HCKP08631 526 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 UBCP0CG48 685 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 CELP19835 753 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 IER3P46695 156 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 RBP2P50120 134 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 NPY4RP50391 375 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 CAV3P56539 151 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 EDDM3BP56851 147 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 RPL31P62899 125 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 ACTC1P68032 377 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 ACTA1P68133 377 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 MZT1Q08AG7 82 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 MED22Q15528 200 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 CXorf66Q5JRM2 361 aaPredicted RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 SIGIRRQ6IA17 410 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 RPL22L1Q6P5R6 122 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 C16orf87Q6PH81 154 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 ASCL4Q6XD76 172 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 C9orf139Q6ZV77 190 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 UTS2BQ765I0 119 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 FAM220AQ7Z4H9 259 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 LRRTM1Q86UE6 522 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 SERPINA12Q8IW75 414 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 C8orf59Q8N0T1 100 aaPredicted RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 STX19Q8N4C7 294 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 PACRGLQ8N7B6 248 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 ZNF114Q8NC26 417 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 TMEM116Q8NCL8 245 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 TMEM104Q8NE00 496 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 OR4D6Q8NGJ1 314 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 ZNF418Q8TF45 676 aaPredicted RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 CCDC107Q8WV48 283 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 TSEN15Q8WW01 171 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 EMG1Q92979 244 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 C12orf43Q96C57 262 aaKnown RBP3.4□□□□□ -1.87
SPG11-211ENST00000558561 CNBD2Q96M20 576 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 FAM110AQ9BQ89 295 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 PPA2Q9H2U2 334 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms