RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 OR1L1Q8NH94 360 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 IL1F10Q8WWZ1 152 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 SNAPC3Q92966 411 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 DACT3Q96B18 629 aaPredicted RBP7.9□□□□□ -1.14
CUX1-216ENST00000558469 TMEM186Q96B77 213 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 SDHCQ99643 169 aaPredicted RBP7.9□□□□□ -1.14
CUX1-216ENST00000558469 THAP7Q9BT49 309 aaPredicted RBP7.9□□□□□ -1.14
CUX1-216ENST00000558469 WDR12Q9GZL7 423 aaKnown RBP7.9□□□□□ -1.14
CUX1-216ENST00000558469 CALYQ9NYX4 217 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 MTFP1Q9UDX5 166 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 OPN4Q9UHM6 478 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 INSIG2Q9Y5U4 225 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 ABCA1O95477 2261 aa7.9□□□□□ -1.15
CUX1-216ENST00000558469 hCG_1809904A0A1W2PP81 198 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 A0A1W2PPE2 198 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 A0A1W2PR64 198 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 A0A1W2PRV1 198 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 C17orf98A8MV24 154 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 C15orf65H3BRN8 121 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 J3QRK9 145 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 M0R1W7 72 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 FABP7O15540 132 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 MMP23AO75900 390 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ZNF16P17020 682 aaPredicted RBP7.89□□□□□ -1.15
CUX1-216ENST00000558469 NAT1P18440 290 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 HLA-DMAP28067 261 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 RCVRNP35243 200 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 KIR2DS4P43632 304 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 PPP5CP53041 499 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ARPC4P59998 168 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ACTBP60709 375 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ACTG1P63261 375 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 SSBP1Q04837 148 aaKnown RBP7.89□□□□□ -1.15
CUX1-216ENST00000558469 KIR2DS1Q14954 304 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 HMGN3Q15651 99 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 BAK1Q16611 211 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 CHRFAM7AQ494W8 412 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 IGSF11Q5DX21 431 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 PRAMEF5Q5TYX0 476 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 METTL11BQ5VVY1 283 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 FAHD2BQ6P2I3 314 aaPredicted RBP7.89□□□□□ -1.15
CUX1-216ENST00000558469 HEPN1Q6WQI6 88 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 SPNS3Q6ZMD2 512 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 Q6ZS49 121 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ZNF554Q86TJ5 538 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 LYSMD2Q8IV50 215 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 KIR3DL3Q8N743 410 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 Q8N7P7 452 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 OR4A4PQ8NGN8 299 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 GALMQ96C23 342 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 FAHD2AQ96GK7 314 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 COX4I2Q96KJ9 171 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 DMRTB1Q96MA1 342 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 RAB9BQ9NP90 201 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 IDI2-AS1Q9NZ38 188 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ANXA10Q9UJ72 324 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 ANAPC10Q9UM13 185 aa7.89□□□□□ -1.15
CUX1-216ENST00000558469 CREBBPQ92793 2442 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 IGHV3-43A0A0B4J1X8 118 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 NPIPB11E5RHQ5 1161 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 F2RL2O00254 374 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 SDCBPO00560 298 aaPredicted RBP7.88□□□□□ -1.15
CUX1-216ENST00000558469 BET1O15155 118 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 TOX4O94842 621 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 PMP2P02689 132 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 RBP4P02753 201 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 CSF1P09603 554 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 IGHV1-8P0DP01 117 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 IGHV3-43DP0DP04 118 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 FPR2P25090 351 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 NFYBP25208 207 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 CD40LGP29965 261 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 GDNFP39905 211 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 OR3A3P47888 321 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 RFX2P48378 723 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 DLX1P56177 255 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 PAX8Q06710 450 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 TRIQKQ629K1 86 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 ZNF782Q6ZMW2 699 aaPredicted RBP7.88□□□□□ -1.15
CUX1-216ENST00000558469 C1orf122Q6ZSJ8 110 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 VMO1Q7Z5L0 202 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 C11orf42Q8N5U0 333 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 OR5AP2Q8NGF4 316 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 C18orf12Q96KH6 178 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 PCGF1Q9BSM1 259 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 SIRPDQ9H106 197 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 METTL8Q9H825 291 aaKnown RBP7.88□□□□□ -1.15
CUX1-216ENST00000558469 LINC00574Q9H8X3 128 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 OR2S2Q9NQN1 319 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 RBMX2Q9Y388 322 aaKnown RBP7.88□□□□□ -1.15
CUX1-216ENST00000558469 KPTNQ9Y664 436 aa7.88□□□□□ -1.15
CUX1-216ENST00000558469 ACANP16112 2415 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 IGKV1-6A0A0C4DH72 117 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 ANKRD20A5PA0PJZ0 165 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 FAM172BPA6NC97 362 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 ZNF736B4DX44 427 aaPredicted RBP7.87□□□□□ -1.15
CUX1-216ENST00000558469 M0QYG6 137 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 HSPA12AO43301 675 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms