RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LRRC42Q9Y546 428 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 A0A1W2PPK0 400 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 H0YHG0 523 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 AIPO00170 330 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 FGF16O43320 207 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 SC5DO75845 299 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 MAS1P04201 325 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 AMY1AP04745 511 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 AMY2AP04746 511 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 CD28P10747 220 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 IL3RAP26951 378 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 LOXL3P58215 753 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 EBI3Q14213 229 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 ACSM3Q53FZ2 586 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 C6orf183Q5T699 404 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 AWAT2Q6E213 333 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 OR10X1Q8NGY0 326 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 NEK7Q8TDX7 302 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 ARL11Q969Q4 196 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 MUL1Q969V5 352 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 ORAI1Q96D31 301 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 CITED2Q99967 270 aaPredicted RBP8.06□□□□□ -1.12
USP3-207ENST00000558218 CST11Q9H112 138 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 DUSP21Q9H596 190 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 PLXNB1O43157 2135 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 MEGF8Q7Z7M0 2845 aa8.06□□□□□ -1.12
USP3-207ENST00000558218 A0A1W2PPI3 338 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 FAM172BPA6NC97 362 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 MAGEA13PA6NCF6 341 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 PTGES3LE9PB15 166 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 SDCBPO00560 298 aaPredicted RBP8.05□□□□□ -1.12
USP3-207ENST00000558218 SPINT2O43291 252 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 TXNL1O43396 289 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 LPLP06858 475 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 MGMTP16455 207 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 SRMP19623 302 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 CD24P25063 80 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 SSTR5P35346 364 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 TRAM1Q15629 374 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 ABCA11PQ4W5N1 156 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 LY6G6FQ5SQ64 297 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 C1orf100Q5SVJ3 147 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 KPRPQ5T749 579 aaPredicted RBP8.05□□□□□ -1.12
USP3-207ENST00000558218 GLT8D1Q68CQ7 371 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 RAB12Q6IQ22 244 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 REC114Q7Z4M0 266 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 C11orf44Q8N8P7 122 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 WFDC9Q8NEX5 89 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 VCX3BQ9H321 246 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 ISYNA1Q9NPH2 558 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 ETAA1Q9NY74 926 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 TRAPPC2LQ9UL33 140 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 MOB4Q9Y3A3 225 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 PEX16Q9Y5Y5 336 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 VWFP04275 2813 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
USP3-207ENST00000558218 A0A1W2PP11 408 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 BPNT1O95861 308 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 SNRNP70P08621 437 aaKnown RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 PSMA1P25786 263 aaKnown RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 CD1BP29016 333 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 SLC6A1P30531 599 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 ZNF137PP52743 207 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 SLC35A2P78381 396 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 TPBGQ13641 420 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 IRF3Q14653 427 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 UTF1Q5T230 341 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 SYT6Q5T7P8 510 aaPredicted RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 COMMD1Q8N668 190 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 DRAM1Q8N682 238 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 OR4X2Q8NGF9 303 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 OR8H1Q8NGG4 311 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 OR56B4Q8NH76 319 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 KCNG3Q8TAE7 436 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 ST6GALNAC6Q969X2 333 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 R3HDM4Q96D70 268 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 Q96M66 194 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 OR5M11Q96RB7 305 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 SELENOIQ9C0D9 397 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 MBNL3Q9NUK0 354 aaKnown RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 KCNIP1Q9NZI2 227 aa8.04□□□□□ -1.12
USP3-207ENST00000558218 NKX1-2Q9UD57 310 aaPredicted RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 LSM2Q9Y333 95 aaKnown RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 TSSC4Q9Y5U2 329 aaPredicted RBP8.04□□□□□ -1.12
USP3-207ENST00000558218 TRAV39A0A0B4J263 110 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 IGHV1-3A0A0C4DH29 117 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 PNMA8CA0A1B0GUJ8 204 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 TCRBV4S1A1TA0A5B7 111 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 ERICH4A6NGS2 130 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 C12orf77C9JDV5 145 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 HSD17B6O14756 317 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
USP3-207ENST00000558218 PDCD6O75340 191 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 CRTAPO75718 401 aaPredicted RBP8.03□□□□□ -1.12
USP3-207ENST00000558218 UCHL1P09936 223 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 TMEM11P17152 192 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 MYF6P23409 242 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 HSPA13P48723 471 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms