RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 MIXL1Q9H2W2 232 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 TAF9BQ9HBM6 251 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 EXTL2Q9UBQ6 330 aa8.57□□□□□ -1.04
LRRC28-204ENST00000558172 TRAV40A0A0B4J280 105 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 IGHV1-69DA0A0B4J2H0 117 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 TMEM235A6NFC5 223 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 TRDCB7Z8K6 153 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 RNASEK-C17orf49H0YIS7 233 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 CRLF1O75462 422 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 IGHV1-69P01742 117 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HLA-DQB1P01920 261 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HBZP02008 142 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 FCGR3AP08637 254 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HOXB4P17483 251 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-204ENST00000558172 OMGP23515 440 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 CD34P28906 385 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 PRSS3P35030 304 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 SSTR5P35346 364 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HLA-DRB3P79483 266 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HTD2P86397 168 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HMGN3Q15651 99 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 Q3ZCU0 254 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 KLF17Q5JT82 389 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-204ENST00000558172 PRAMEF5Q5TYX0 476 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 ZNF782Q6ZMW2 699 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-204ENST00000558172 OR11H6Q8NGC7 330 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 RFESDQ8TAC1 157 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 GALMQ96C23 342 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 DIRAS2Q96HU8 199 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 KIRREL1Q96J84 757 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 CYYR1Q96J86 154 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
LRRC28-204ENST00000558172 HDHD3Q9BSH5 251 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-204ENST00000558172 ELF5Q9UKW6 265 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-204ENST00000558172 MRPS7Q9Y2R9 242 aaKnown RBP8.56□□□□□ -1.04
LRRC28-204ENST00000558172 SULT1C2O00338 296 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 SDCBPO00560 298 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-204ENST00000558172 MMP23AO75900 390 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 DIRAS3O95661 229 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 IGHV4-38-2P0DP08 117 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 SRD5A1P18405 259 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 NFYBP25208 207 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 PRRX1P54821 245 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 MIDNQ504T8 468 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 LY6G6FQ5SQ64 297 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 STEAP3Q658P3 488 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 CNIH2Q6PI25 160 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 C9orf139Q6ZV77 190 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 IL17RELQ6ZVW7 336 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 LAX1Q8IWV1 398 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 IZUMO1Q8IYV9 350 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 ABHD12Q8N2K0 398 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 PNKDQ8N490 385 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 PRR18Q8N4B5 295 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 OR4A4PQ8NGN8 299 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 OR9G1Q8NH87 305 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 NUDCD2Q8WVJ2 157 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 SUCNR1Q9BXA5 334 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 CLEC7AQ9BXN2 247 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 MS4A7Q9GZW8 240 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-204ENST00000558172 SCPEP1Q9HB40 452 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 ZNF286AQ9HBT8 521 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 GFOD1Q9NXC2 390 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 JPT1Q9UK76 154 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 MXRA5Q9NR99 2828 aa8.55□□□□□ -1.04
LRRC28-204ENST00000558172 IGHV2-26A0A0B4J1V2 119 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 TOR1AO14656 332 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 NPFFO15130 113 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 SSX5O60225 188 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 YPEL1O60688 119 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 RGS11O94810 467 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 CTXN2P0C2S0 81 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 FAM157CP0CG43 387 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 COX7A1P24310 79 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 TNFSF8P32971 234 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 GDNFP39905 211 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 LGALS4P56470 323 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 LOXL3P58215 753 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 MRPS10P82664 201 aaKnown RBP8.54□□□□□ -1.04
LRRC28-204ENST00000558172 KLRD1Q13241 179 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 LTC4SQ16873 150 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 ZNF626Q68DY1 528 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 PYHIN1Q6K0P9 492 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 HCP5Q6MZN7 132 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 Q6ZPA2 131 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 HOGA1Q86XE5 327 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 C8orf31Q8N9H6 132 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 DTX3Q8N9I9 347 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 BEND2Q8NDZ0 799 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 OR1L1Q8NH94 360 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 ZNF596Q8TC21 504 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 CREB3L1Q96BA8 519 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 YPEL2Q96QA6 119 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 ST6GALNAC5Q9BVH7 336 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 OR2S2Q9NQN1 319 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
LRRC28-204ENST00000558172 ZNF230Q9UIE0 474 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-204ENST00000558172 TBL2Q9Y4P3 447 aaKnown RBP8.54□□□□□ -1.04
LRRC28-204ENST00000558172 SETD2Q9BYW2 2564 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-204ENST00000558172 IGHV3OR16-10A0A075B7F0 116 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms