RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 NAPSAO96009 420 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 MELTFP08582 738 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 HTR1DP28221 377 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 PLAC9Q5JTB6 97 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 MOB1BQ7L9L4 216 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 SLC25A46Q96AG3 418 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 CMSS1Q9BQ75 279 aaKnown RBP13.6□□□□□ -0.23
PBX4-202ENST00000557978 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 ZNF286AQ9HBT8 521 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 ESM1Q9NQ30 184 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 RHBDL2Q9NX52 303 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 AK3Q9UIJ7 227 aa13.6□□□□□ -0.23
PBX4-202ENST00000557978 TRBV6-6A0A0A6YYG2 114 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 F2RL2O00254 374 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 HOXA3O43365 443 aaPredicted RBP13.59□□□□□ -0.23
PBX4-202ENST00000557978 IGLV1-47P01700 117 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 UBA52P62987 128 aaKnown RBP13.59□□□□□ -0.23
PBX4-202ENST00000557978 SLC9A3R2Q15599 337 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 CTF1Q16619 201 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 LTC4SQ16873 150 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 MOGAT2Q3SYC2 334 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 PRR18Q8N4B5 295 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 KCTD12Q96CX2 325 aaKnown RBP13.59□□□□□ -0.23
PBX4-202ENST00000557978 NAA50Q9GZZ1 169 aaKnown RBP13.59□□□□□ -0.23
PBX4-202ENST00000557978 C12orf4Q9NQ89 552 aa13.59□□□□□ -0.23
PBX4-202ENST00000557978 BTBD17A6NE02 478 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 SERPINE3A8MV23 424 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 SDCBPO00560 298 aaPredicted RBP13.58□□□□□ -0.24
PBX4-202ENST00000557978 HBZP02008 142 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 CD3GP09693 182 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 HIST1H1DP16402 221 aaKnown RBP13.58□□□□□ -0.24
PBX4-202ENST00000557978 CEACAM3P40198 252 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 IER3P46695 156 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 AANATQ16613 207 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 Q3ZCU0 254 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 ZNF880Q6PDB4 577 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 BAIAP2L2Q6UXY1 529 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.24
PBX4-202ENST00000557978 NDNFQ8TB73 568 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 SETD6Q8TBK2 473 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 GFOD1Q9NXC2 390 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 DPM3Q9P2X0 92 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
PBX4-202ENST00000557978 A0A075B6Q4 140 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 A0A0A6YYH2 397 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 A6NJ64 397 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 LEUTXA8MZ59 168 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 J3QR06 171 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 MFNGO00587 321 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 RNASE1P07998 156 aaKnown RBP13.57□□□□□ -0.24
PBX4-202ENST00000557978 RORCP51449 518 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 TMBIM6P55061 237 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 LOXL3P58215 753 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 SRSF2Q01130 221 aaKnown RBP13.57□□□□□ -0.24
PBX4-202ENST00000557978 HLA-DRB5Q30154 266 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 OR4P4Q8NGL7 312 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 OR5H6Q8NGV6 325 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 OR5R1Q8NH85 324 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 FAM216AQ8WUB2 273 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 RAB2BQ8WUD1 216 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 C17orf50Q8WW18 174 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 GALMQ96C23 342 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 AJUBAQ96IF1 538 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 CYYR1Q96J86 154 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 BCL7BQ9BQE9 202 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 MMP28Q9H239 520 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 DCSTAMPQ9H295 470 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.57□□□□□ -0.24
PBX4-202ENST00000557978 DIABLOQ9NR28 239 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 GNG12Q9UBI6 72 aa13.57□□□□□ -0.24
PBX4-202ENST00000557978 AMMECR1Q9Y4X0 333 aaPredicted RBP13.57□□□□□ -0.24
PBX4-202ENST00000557978 BUB1B-PAK6H3BSN5 160 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 GNB3P16520 340 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 HTD2P86397 168 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 HMGN3Q15651 99 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 SSX2Q16385 188 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 C8orf31Q8N9H6 132 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 SSX3Q99909 188 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 OR2S2Q9NQN1 319 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 KCNK7Q9Y2U2 307 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 IGHV3-43A0A0B4J1X8 118 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 RNF212BA8MTL3 300 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 NOL3O60936 208 aaKnown RBP13.56□□□□□ -0.24
PBX4-202ENST00000557978 IGHV4-59P01825 116 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 GSTP1P09211 210 aaKnown RBP13.56□□□□□ -0.24
PBX4-202ENST00000557978 IGHV3-43DP0DP04 118 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 TALDO1P37837 337 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 ARHGDIBP52566 201 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 PITPNAQ00169 270 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 ARFRP1Q13795 201 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 LRRC75BQ2VPJ9 315 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 KRTAP24-1Q3LI83 254 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 CDNFQ49AH0 187 aa13.56□□□□□ -0.24
PBX4-202ENST00000557978 OLFML2AQ68BL7 652 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms