RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 TMEM171Q8WVE6 324 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 CPNE4Q96A23 557 aaPredicted RBP11.3□□□□□ -0.6
CPNE6-204ENST00000557829 TVP23CQ96ET8 276 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 TNRC6AQ8NDV7 1962 aaKnown RBP11.3□□□□□ -0.6
CPNE6-204ENST00000557829 MED13Q9UHV7 2174 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 A0A0G2JMM0 328 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 A0A1W2PPB8 328 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 SLC22A20A6NK97 555 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 KIR3DP1A8MWS1 328 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 B4DEV8 164 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 H0Y980 276 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 TXNL1O43396 289 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 CYTIPO60759 359 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 PATE4P0C8F1 98 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 DYNLT3P51808 116 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 TAS2R30P59541 319 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 OR2B8PP59922 312 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 ICAM4Q14773 271 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 Q3ZCU0 254 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 CXorf66Q5JRM2 361 aaPredicted RBP11.3□□□□□ -0.6
CPNE6-204ENST00000557829 SPIN3Q5JUX0 258 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 ODF3L1Q8IXM7 274 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 PLPPR1Q8TBJ4 325 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 RAB39BQ96DA2 213 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 ALKBH3Q96Q83 286 aaPredicted RBP11.3□□□□□ -0.6
CPNE6-204ENST00000557829 ATP5SQ99766 215 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 SCNM1Q9BWG6 230 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 GLRX2Q9NS18 164 aa11.3□□□□□ -0.6
CPNE6-204ENST00000557829 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 CXCL13O43927 109 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 TAGLN2P37802 199 aaKnown RBP11.29□□□□□ -0.6
CPNE6-204ENST00000557829 NPBWR2P48146 333 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 ASCL1P50553 236 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 UBE2KP61086 200 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
CPNE6-204ENST00000557829 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 GAPTQ8N292 157 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
CPNE6-204ENST00000557829 LINC00470Q9BZP3 86 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 GAR1Q9NY12 217 aaKnown RBP11.29□□□□□ -0.6
CPNE6-204ENST00000557829 ATP23Q9Y6H3 246 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 USP24Q9UPU5 2620 aa11.29□□□□□ -0.6
CPNE6-204ENST00000557829 ZNF587BE7ETH6 402 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 NKX2-8O15522 239 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 COX5BP10606 129 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 S100GP29377 79 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
CPNE6-204ENST00000557829 PDCD1Q15116 288 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 MKXQ8IYA7 352 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 OR10D3Q8NH80 312 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 CLDND2Q8NHS1 167 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 PFDN5Q99471 154 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 ABHD14AQ9BUJ0 271 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 MGAQ8IWI9 3026 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 A0A1B0GU03 582 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
CPNE6-204ENST00000557829 BCL3P20749 454 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 ITGA3P26006 1051 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 RPS10P46783 165 aaKnown RBP11.28□□□□□ -0.6
CPNE6-204ENST00000557829 PRSS12P56730 875 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 RAB4BP61018 213 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 CEACAM21Q3KPI0 293 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 ACSF3Q4G176 576 aaPredicted RBP11.28□□□□□ -0.6
CPNE6-204ENST00000557829 STX12Q86Y82 276 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 RNF115Q9Y4L5 304 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 ARID1AO14497 2285 aa11.28□□□□□ -0.6
CPNE6-204ENST00000557829 NBEAQ8NFP9 2946 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 LRP5LA4QPB2 252 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 ST8SIA5O15466 376 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 CHST1O43916 411 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 SCTP09683 121 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 OMGP23515 440 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 GLIPR1P48060 266 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 PAX9P55771 341 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 DLK1P80370 383 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 CLN3Q13286 438 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 ELOBQ15370 118 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 NAXEQ8NCW5 288 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 SLAMF9Q96A28 289 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 RAB40CQ96S21 281 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 MAGT1Q9H0U3 335 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 LIPGQ9Y5X9 500 aa11.27□□□□□ -0.6
CPNE6-204ENST00000557829 IGKV3D-15A0A087WSY6 115 aa11.27□□□□□ -0.61
CPNE6-204ENST00000557829 A0A1B0GV50 99 aa11.27□□□□□ -0.61
CPNE6-204ENST00000557829 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
CPNE6-204ENST00000557829 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
CPNE6-204ENST00000557829 TMEM50AO95807 157 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms