RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GALMQ96C23 342 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 SLC6A7Q99884 636 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 DCSTAMPQ9H295 470 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 KCNK15Q9H427 330 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 ING3Q9NXR8 418 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 MFNGO00587 321 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 ARG1P05089 322 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
SHMT2-234ENST00000557703 ZNF182P17025 639 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-234ENST00000557703 DTYMKP23919 212 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 HTR1DP28221 377 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 KIR2DS4P43632 304 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 DYNLT3P51808 116 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 EFNB2P52799 333 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 KIR2DS1Q14954 304 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 PLAC9Q5JTB6 97 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 UBE2NLQ5JXB2 153 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 ZNF782Q6ZMW2 699 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-234ENST00000557703 CLVS1Q8IUQ0 354 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-234ENST00000557703 LINC00311Q8N616 119 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 DTX3Q8N9I9 347 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 OR4K15Q8NH41 348 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 DYRK2Q92630 601 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 TAF9BQ9HBM6 251 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 CHMP1AQ9HD42 196 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-234ENST00000557703 NDUFA13Q9P0J0 144 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 DPM3Q9P2X0 92 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 AK3Q9UIJ7 227 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 JPT1Q9UK76 154 aa11.14□□□□□ -0.63
SHMT2-234ENST00000557703 A0A0B4J203 849 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 BTBD17A6NE02 478 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 LEUTXA8MZ59 168 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 C12orf77C9JDV5 145 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 XRCC3O43542 346 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 HBZP02008 142 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 APOA1P02647 267 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 MELTFP08582 738 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 RCC1P18754 421 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-234ENST00000557703 TALDO1P37837 337 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 LOXL3P58215 753 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 HMGN3Q15651 99 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 DEFB112Q30KQ8 113 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 PRAMEF5Q5TYX0 476 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 HACD4Q5VWC8 232 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 BCL6BQ8N143 479 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-234ENST00000557703 SIGLECL1Q8N7X8 197 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 C15orf40Q8WUR7 153 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 CCDC107Q8WV48 283 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 MMP28Q9H239 520 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 ZNRD1Q9P1U0 126 aa11.13□□□□□ -0.63
SHMT2-234ENST00000557703 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 A0A0U1RQK1 487 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 SMIM31A0A1B0GVY4 71 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 SMIM30A4D0T7 59 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 J3QR06 171 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 SDCBPO00560 298 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-234ENST00000557703 ITGB1BP1O14713 200 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 YPEL1O60688 119 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 MMP23AO75900 390 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 LPLP06858 475 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 OMGP23515 440 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 NFYBP25208 207 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 SSTR5P35346 364 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 IER3P46695 156 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 BAMBIQ13145 260 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 KLRD1Q13241 179 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 ZNF260Q3ZCT1 412 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 RFESDQ8TAC1 157 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 C22orf15Q8WYQ4 148 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 SLC25A38Q96DW6 304 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 YPEL2Q96QA6 119 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 Q9N2K0 584 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 GNG12Q9UBI6 72 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 RABL2AQ9UBK7 228 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-234ENST00000557703 RABL2BQ9UNT1 228 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 PSG11Q9UQ72 335 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 KCNK7Q9Y2U2 307 aa11.12□□□□□ -0.63
SHMT2-234ENST00000557703 TRDCB7Z8K6 153 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 BUB1B-PAK6H3BSN5 160 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
SHMT2-234ENST00000557703 CTXN2P0C2S0 81 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 GNB3P16520 340 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 ZBTB25P24278 435 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 COX7A1P24310 79 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 IL3RAP26951 378 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 BRS3P32247 399 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 TGFBR1P36897 503 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 MNDAP41218 407 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 CBX5P45973 191 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms