RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SPI1P17947 270 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 ZP3P21754 424 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 NFYBP25208 207 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 BMI1P35226 326 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 PTGFRP43088 359 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF45Q02386 682 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 SF3A3Q12874 501 aaKnown RBP eCLIP3.51□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF585BQ52M93 769 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 LRRC23Q53EV4 343 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-223ENST00000557076 IFI44LQ53G44 452 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 SPIN3Q5JUX0 258 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 LINC01590Q5TEZ4 76 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 ASRGL1Q7L266 308 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 LYG2Q86SG7 212 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 BATF2Q8N1L9 274 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 DEFB125Q8N687 156 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 TMEM217Q8N7C4 229 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 GVQW1Q8N7I0 195 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 MAPKAPK5-AS1Q8N8E1 139 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 SLC37A3Q8NCC5 494 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 OR10A7Q8NGE5 316 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 OR9G4Q8NGQ1 327 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 OR10X1Q8NGY0 326 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 RNF183Q96D59 192 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 INTS14Q96SY0 518 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 AMELYQ99218 206 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 EBF4Q9BQW3 602 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 NEURL2Q9BR09 285 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 PLEKHA3Q9HB20 300 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 SLC25A19Q9HC21 320 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 RANGRFQ9HD47 186 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-223ENST00000557076 SLC2A8Q9NY64 477 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 IL20Q9NYY1 176 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 NDUFAF4Q9P032 175 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF107Q9UII5 783 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-223ENST00000557076 RAB21Q9UL25 225 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 TP53TG1Q9Y2A0 90 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 FBXO7Q9Y3I1 522 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 U3KQV3 271 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 IGHV3-72A0A0B4J1Y9 119 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 TMEM269A0A1B0GVZ9 245 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 IZUMO1RA6ND01 250 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 MSGN1A6NI15 193 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 DHRS7CA6NNS2 312 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 NPIPB11E5RHQ5 1161 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 J3KRW8 73 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 HSD17B6O14756 317 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 RTL8CO15255 209 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 SOX15O60248 233 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 DHRS3O75911 302 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 CSN2P05814 226 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 LYNP07948 512 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 DUSP1P28562 367 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 C21orf33P30042 268 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-223ENST00000557076 HTR1FP30939 366 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 IFNGR2P38484 337 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 GSSP48637 474 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-223ENST00000557076 SMIM11AP58511 58 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 CD81P60033 236 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 AESQ08117 197 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 TMEM267Q0VDI3 215 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-223ENST00000557076 TATDN3Q17R31 274 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 KRT71Q3SY84 523 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 MOGAT2Q3SYC2 334 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 FAM90A2PQ658T7 463 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 PYHIN1Q6K0P9 492 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 RPL13AP3Q6NVV1 102 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 DEGS2Q6QHC5 323 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 Q6ZSR3 168 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 RDH10Q8IZV5 341 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 FAM58AQ8N1B3 248 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 C17orf53Q8N3J3 647 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-223ENST00000557076 LINC00311Q8N616 119 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 TCTEX1D1Q8N7M0 179 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 YIPF7Q8N8F6 280 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 OR2T12Q8NG77 320 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 OR6K6Q8NGW6 343 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 OR52J3Q8NH60 311 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 OTOSQ8NHW6 89 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 OR51E1Q8TCB6 317 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 TEAD3Q99594 435 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 OSBPL10Q9BXB5 764 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 BARHL1Q9BZE3 327 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 PBOV1Q9GZY1 135 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 SRD5A3Q9H8P0 318 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 PLEKHA2Q9HB19 425 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 GPR84Q9NQS5 396 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 NDE1Q9NXR1 346 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 FOXA2Q9Y261 457 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-223ENST00000557076 NUBP2Q9Y5Y2 271 aa3.5□□□□□ -1.85
SCFD1-223ENST00000557076 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 APOBP04114 4563 aaKnown RBP3.49□□□□□ -1.85
SCFD1-223ENST00000557076 IGHV7-81A0A0B4J1V7 117 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 TRBV2A0A0J9YWF9 115 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 FAM220BPB1ANY3 271 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF736B4DX44 427 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-223ENST00000557076 FXYD1O00168 92 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 ATP6V0E1O15342 81 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 ENTPD6O75354 484 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms