RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 THEGLP0DJG4 465 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 BCL2P10415 239 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FGF5P12034 268 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SLC25A6P12236 298 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FCGR2AP12318 317 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 NR2C1P13056 603 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FOSL2P15408 326 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 KLK2P20151 261 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 GNRHRP30968 328 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 APLNRP35414 380 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 GALR1P47211 349 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR3A1P47881 315 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR1D4P47884 311 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PCP4P48539 62 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PSMB3P49720 205 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 IDH3GP51553 393 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 EFNA3P52797 238 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 BIDP55957 195 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SLC37A1P57057 533 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF121P58317 390 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 YPEL5P62699 121 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PAFAH1B2P68402 229 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 HIST1H3AP68431 136 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SERF2P84101 59 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 CFHR3Q02985 330 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TLE3Q04726 772 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 C17orf67Q0P5P2 114 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PLCXD2Q0VAA5 305 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FOXF1Q12946 379 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 RUNX3Q13761 415 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 HERPUD1Q15011 391 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SP6Q3SY56 376 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PHLDA2Q53GA4 152 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FAM90A2PQ658T7 463 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 NCR3LG1Q68D85 454 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM211Q6ICI0 200 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SLC25A47Q6Q0C1 308 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF705AQ6ZN79 300 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 Q6ZSR3 168 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FAM57BQ71RH2 274 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 C16orf82Q7Z2V1 217 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ABHD12BQ7Z5M8 362 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 CENPVQ7Z7K6 275 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 RTN4RL2Q86UN3 420 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 UEVLDQ8IX04 471 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 MAML2Q8IZL2 1156 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SELENOHQ8IZQ5 122 aaKnown RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 CLEC18CQ8NCF0 446 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ADPRHL1Q8NDY3 354 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR8B12Q8NGG6 310 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR52M1Q8NGK5 317 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR5C1Q8NGR4 320 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR2T10Q8NGZ9 312 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR2V1Q8NHB1 315 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR10J5Q8NHC4 309 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OSR1Q8TAX0 266 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SSC4DQ8WTU2 575 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 CA5BP1Q8WTZ4 195 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PTPMT1Q8WUK0 201 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PP6455Q8WZ26 134 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 DNASE2BQ8WZ79 361 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ST8SIA1Q92185 356 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 IL22RA2Q969J5 263 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TOMM40LQ969M1 308 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TSACCQ96A04 125 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ADIPOR1Q96A54 375 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 FAM131CQ96AQ9 280 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SPSB1Q96BD6 273 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PINX1Q96BK5 328 aaKnown RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 MOB3AQ96BX8 217 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 MMABQ96EY8 250 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SNX22Q96L94 193 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM56Q96MV1 263 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SPACA5Q96QH8 159 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 RAB40CQ96S21 281 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 IMMP2LQ96T52 175 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 MIEN1Q9BRT3 115 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ATG101Q9BSB4 218 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PSMG3Q9BT73 122 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ABHD14AQ9BUJ0 271 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SNHG12Q9BXW3 62 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PARD6GQ9BYG4 376 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 VN1R1Q9GZP7 353 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 MAP1LC3BQ9GZQ8 125 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 NXF5Q9H1B4 397 aaKnown RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 OR51I2Q9H344 312 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PLK3Q9H4B4 646 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 C11orf1Q9H5F2 150 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 CALHM2Q9HA72 323 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF160Q9HCG1 818 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 GPR173Q9NS66 373 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 LYRM2Q9NU23 88 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ALKBH4Q9NXW9 302 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 KLHL13Q9P2N7 655 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 IL17BQ9UHF5 180 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 NAGKQ9UJ70 344 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 NXT1Q9UKK6 140 aaKnown RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 GAB2Q9UQC2 676 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 LAMP3Q9UQV4 416 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM56-RWDD3S4R434 201 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms