RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 C2orf15Q8WU43 125 aaKnown RBP2□□□□□ -2.09
SCFD1-221ENST00000556534 ZCCHC13Q8WW36 166 aaKnown RBP2□□□□□ -2.09
SCFD1-221ENST00000556534 TAMM41Q96BW9 452 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 PPCDCQ96CD2 204 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 SMIM19Q96E16 107 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 REEP6Q96HR9 211 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 SHANK2-AS3Q9BTD1 123 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 TSSK6Q9BXA6 273 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 HMGXB4Q9UGU5 601 aa2□□□□□ -2.09
SCFD1-221ENST00000556534 ADCY9O60503 1353 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 MAP3K5Q99683 1374 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 NAV1Q8NEY1 1877 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 IGKV1OR2-108A0A075B7D4 117 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 DAPL1A0PJW8 107 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 METTL15A6NJ78 407 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 POP7O75817 140 aaKnown RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 PSMG1O95456 288 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 TRGV3P03979 118 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 UGT2B7P16662 529 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 S100A2P29034 98 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 HSPA13P48723 471 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 NUDT2P50583 147 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 MGAT3Q09327 533 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 SMAGPQ0VAQ4 97 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 MLLT11Q13015 90 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 ENDOGQ14249 297 aaKnown RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 PAFAH1B3Q15102 231 aaKnown RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 DNAL1Q4LDG9 190 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 TMEM69Q5SWH9 247 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 TTC33Q6PID6 262 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 ZNF664Q8N3J9 261 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 OR5D18Q8NGL1 313 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 RBPMSQ93062 196 aaKnown RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 CMTM5Q96DZ9 223 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 SMIM12Q96EX1 92 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 METTL9Q9H1A3 318 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 MS4A6AQ9H2W1 248 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 ZNF230Q9UIE0 474 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-221ENST00000556534 TRIOBPQ9H2D6 2365 aa1.99□□□□□ -2.09
SCFD1-221ENST00000556534 DHX57Q6P158 1386 aaKnown RBP1.98□□□□□ -2.09
SCFD1-221ENST00000556534 NACADO15069 1562 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 THOC2Q8NI27 1593 aaKnown RBP1.98□□□□□ -2.09
SCFD1-221ENST00000556534 ZNF407Q9C0G0 2248 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 IGHV3-21A0A0B4J1V1 117 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 A8MWP4 228 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 F5H5P2 479 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 F5H5T6 163 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 AZIN1O14977 448 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 SOX14O95416 240 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 DEXIO95424 95 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 IGKV1D-33P01593 117 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 IGKV1-33P01594 117 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 IGLV7-43P04211 117 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 EVI2BP34910 448 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 ANP32AP39687 249 aaKnown RBP1.98□□□□□ -2.09
SCFD1-221ENST00000556534 MAGEA2P43356 314 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 INPP1P49441 399 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 GTF2BQ00403 316 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 FMODQ06828 376 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 CASP8Q14790 479 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 CENPWQ5EE01 88 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 COQ5Q5HYK3 327 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 SPATA31B1PQ5VZV4 182 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 CPNE9Q8IYJ1 553 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 ZNF680Q8NEM1 530 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 OR9I1Q8NGQ6 314 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 DTD1Q8TEA8 209 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 B9D2Q9BPU9 175 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 TMEM208Q9BTX3 173 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 SLC22A4Q9H015 551 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 TXNIPQ9H3M7 391 aa1.98□□□□□ -2.09
SCFD1-221ENST00000556534 UNC13AQ9UPW8 1703 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 IGHG2P01859 326 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 C8orf88P0DMB2 117 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 PTHLHP12272 177 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 IFNGR2P38484 337 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 BLVRAP53004 296 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 MMDQ15546 238 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 CLEC12BQ2HXU8 276 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 SPNS3Q6ZMD2 512 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 PAGE2Q7Z2X7 111 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 YIPF7Q8N8F6 280 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 OR4C13Q8NGP0 309 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 OR4A5Q8NH83 315 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 SLC37A2Q8TED4 501 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 ASB13Q8WXK3 278 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 KCTD7Q96MP8 289 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 C1orf50Q9BV19 199 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 SPZ1Q9BXG8 430 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 ARL6Q9H0F7 186 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 ALX4Q9H161 411 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-221ENST00000556534 ZNF492Q9P255 531 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 LTBP4Q8N2S1 1624 aa1.97□□□□□ -2.09
SCFD1-221ENST00000556534 IGKV1-12A0A0C4DH73 117 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 ZNF729A6NN14 1252 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-221ENST00000556534 H0Y980 276 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 M0QYV0 167 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 ZW10O43264 779 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 LTAP01374 205 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 IGKV1D-12P01611 117 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms