RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TMUB2Q71RG4 321 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 THAP6Q8TBB0 222 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 GLYATL2Q8WU03 294 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 LRRC46Q96FV0 321 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 COQ2Q96H96 371 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 OR10C1Q96KK4 312 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 MFFQ9GZY8 342 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 KIF25Q9UIL4 384 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 U3KQ87 197 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
VPS33B-205ENST00000556096 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 ZNF737O75373 536 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 AESQ08117 197 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 SP6Q3SY56 376 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 ZNF818PQ6ZRF7 136 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 LGI3Q8N145 548 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 MSI2Q96DH6 328 aaKnown RBP12.32□□□□□ -0.44
VPS33B-205ENST00000556096 SNX22Q96L94 193 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 LURAP1Q96LR2 239 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 TNFSF18Q9UNG2 199 aa12.32□□□□□ -0.44
VPS33B-205ENST00000556096 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
VPS33B-205ENST00000556096 A0A0D9SG52 128 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 C3orf85A0A1B0GTC6 90 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 NKX2-6A6NCS4 301 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 MPTX1A8MV57 137 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 SRPXP78539 464 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 LRRC37A5PQ49AS3 106 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 KRBOX4Q5JUW0 171 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 C6orf183Q5T699 404 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 ADAM5Q6NVV9 412 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TRAT1Q6PIZ9 186 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-205ENST00000556096 CMTM1Q8IZ96 169 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 BVESQ8NE79 360 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 OR10V1Q8NGI7 309 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 IL1F10Q8WWZ1 152 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 CCL28Q9NRJ3 127 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 OR1A1Q9P1Q5 309 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 HELZ2Q9BYK8 2649 aaKnown RBP12.31□□□□□ -0.44
VPS33B-205ENST00000556096 MGST3O14880 152 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 PHF1O43189 567 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-205ENST00000556096 OR2F2O95006 317 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TFF1P04155 84 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 WNT2P09544 360 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 LYL1P12980 280 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 S100GP29377 79 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 GABRA2P47869 451 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 LUMP51884 338 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-205ENST00000556096 OR2F1Q13607 317 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 ZNF345Q14585 488 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TESK1Q15569 626 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 BOLLQ8N9W6 283 aaKnown RBP12.31□□□□□ -0.44
VPS33B-205ENST00000556096 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 ANGPTL6Q8NI99 470 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 GALMQ96C23 342 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 PLPPR2Q96GM1 343 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 ARL6Q9H0F7 186 aa12.31□□□□□ -0.44
VPS33B-205ENST00000556096 FBXO9Q9UK97 447 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-205ENST00000556096 HCFC1P51610 2035 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 C12orf77C9JDV5 145 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 E7EQL1 145 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 HSPA12AO43301 675 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 B3GALNT1O75752 331 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 CD3EP07766 207 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 GLIPR1P48060 266 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 FAM209AQ5JX71 171 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 ACOT7LQ6ZUV0 252 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 CA5BP1Q8WTZ4 195 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 AKR1E2Q96JD6 320 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 TMEM56Q96MV1 263 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 RNF126Q9BV68 326 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 TMEM222Q9H0R3 208 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 NCOR1P1Q9H4R4 102 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 TMEM56-RWDD3S4R434 201 aa12.3□□□□□ -0.44
VPS33B-205ENST00000556096 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-205ENST00000556096 IGHV3OR15-7A0A075B7D8 119 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 K7N7A8 449 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 HSD17B6O14756 317 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 PGLYRP1O75594 196 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-205ENST00000556096 IFNA7P01567 189 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 CEACAM6P40199 344 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 IAH1Q2TAA2 248 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-205ENST00000556096 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 PRSS54Q6PEW0 395 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 PRR18Q8N4B5 295 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 MBD2Q9UBB5 411 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 PPP1R3CQ9UQK1 317 aa12.29□□□□□ -0.44
VPS33B-205ENST00000556096 TMED3Q9Y3Q3 217 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms