RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SCMH1Q96GD3 660 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 ABHD14AQ9BUJ0 271 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
ACTN1-216ENST00000556083 MYO5AQ9Y4I1 1855 aaKnown RBP9.36□□□□□ -0.91
ACTN1-216ENST00000556083 A6NDN8 102 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 PPP1CCP36873 323 aaKnown RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 TNFSF10P50591 281 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 MUC15Q8N387 334 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 OR10A7Q8NGE5 316 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 FAM216AQ8WUB2 273 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 P2RX4Q99571 388 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 VPS25Q9BRG1 176 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 ATG101Q9BSB4 218 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 WASHC3Q9Y3C0 194 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 IGHV1-45A0A0A0MS14 117 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 C7orf66A4D0T2 115 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 C17orf51A8MQB3 221 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 LEUTXA8MZ59 168 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 TSPOP30536 169 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 PTGDSP41222 190 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 DYNLT3P51808 116 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 UCP2P55851 309 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 POLR2GP62487 172 aaKnown RBP eCLIP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 TOMM20LQ6UXN7 152 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 OR4X1Q8NH49 305 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 MYOZ3Q8TDC0 251 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 JPT1Q9UK76 154 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 MOSPD3O75425 235 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 KLF7O75840 302 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 PSG5Q15238 335 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 ELOVL1Q9BW60 279 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 MS4A7Q9GZW8 240 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 PLAC1Q9HBJ0 212 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 ASCL3Q9NQ33 180 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 AP4M1O00189 453 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 TCAPO15273 167 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 PRKNO60260 465 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF735P0CB33 412 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 EWSR1Q01844 656 aaKnown RBP eCLIP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 GAMTQ14353 236 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 MMDQ15546 238 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 PCSK4Q6UW60 755 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 C11orf42Q8N5U0 333 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 TMEM186Q96B77 213 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 SLC25A22Q9H936 323 aa9.35□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF230Q9UIE0 474 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-216ENST00000556083 NUP205Q92621 2012 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 TRBV5-5A0A0J9YX44 114 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 OR2W5A6NFC9 320 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 A6NJY4 79 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 DEFB108AA8MXU0 73 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 BMPR1BO00238 502 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 HPXP02790 462 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 MPV17P39210 176 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 DLX1P56177 255 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 IGLV3-21P80748 117 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 SLC25A47Q6Q0C1 308 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 MDP1Q86V88 176 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 C1orf162Q8NEQ5 155 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 ADAMTS17Q8TE56 1095 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 NEURL2Q9BR09 285 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 TMEM70Q9BUB7 260 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 IFT22Q9H7X7 185 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF729A6NN14 1252 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 KIAA1324LA8MWY0 1029 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 PRSS1P07477 247 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 MYF5P13349 255 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 PMCHP20382 165 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 FAM3BP58499 235 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 H3BMH7 237 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 PHOX2AO14813 284 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 CIDEAO60543 219 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 IGHMP01871 453 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 UCP3P55916 312 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 PSG9Q00887 426 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 ORAI1Q96D31 301 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 C12orf57Q99622 126 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 SS18L1O75177 396 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 ZNF253O75346 499 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 FOXH1O75593 365 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 SCO1O75880 301 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 MELTFP08582 738 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 OR8G5Q8NG78 346 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 TMEM37Q8WXS4 190 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 RBM14Q96PK6 669 aaKnown RBP9.34□□□□□ -0.91
ACTN1-216ENST00000556083 PIMREGQ9BSJ6 248 aa9.34□□□□□ -0.91
ACTN1-216ENST00000556083 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 CYB5R2Q6BCY4 276 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 UBTD1Q9HAC8 227 aa9.33□□□□□ -0.92
ACTN1-216ENST00000556083 CCL28Q9NRJ3 127 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms