RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 GLCCI1Q86VQ1 547 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 GVQW1Q8N7I0 195 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 OR13A1Q8NGR1 328 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 C8orf46Q8TAG6 207 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 FAM216AQ8WUB2 273 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 MAFIPQ8WZ33 124 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 CORO2AQ92828 525 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 KIRREL1Q96J84 757 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 REG4Q9BYZ8 158 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 COPZ2Q9P299 210 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF69Q9UC07 566 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 SLC23A1Q9UHI7 598 aa9.27□□□□□ -0.93
SHMT2-220ENST00000555634 RBM7Q9Y580 266 aaKnown RBP9.27□□□□□ -0.93
SHMT2-220ENST00000555634 CR1P17927 2039 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 TRAV20A0A0B4J274 112 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 IGHV2-70DA0A0C4DH43 119 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 FAM172BPA6NC97 362 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 C12orf77C9JDV5 145 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 RNF223E7ERA6 249 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 M0R1W7 72 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 LYRM1O43325 122 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 HBZP02008 142 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 PMP2P02689 132 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 CD3DP04234 171 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 MSMBP08118 114 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 OR5H8P0DN80 308 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 NAT1P18440 290 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 RCC1P18754 421 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-220ENST00000555634 NFYBP25208 207 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 HTD2P86397 168 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 BAK1Q16611 211 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 SCGB2B2Q4G0G5 96 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 VAX1Q5SQQ9 334 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF841Q6ZN19 808 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 LINC01356Q8N9X3 169 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 POC5Q8NA72 575 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 OR4C16Q8NGL9 310 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 OR6F1Q8NGZ6 308 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 SNAPC3Q92966 411 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 CABLES2Q9BTV7 478 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 OR2S2Q9NQN1 319 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 IDI2-AS1Q9NZ38 188 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 FBN2P35556 2912 aa9.26□□□□□ -0.93
SHMT2-220ENST00000555634 POLQO75417 2590 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 M0QYG6 137 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 PTTG1O95997 202 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 CD74P04233 296 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 RAB7AP51149 207 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 LMO4P61968 165 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 ASAH1Q13510 395 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 KLF9Q13886 244 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-220ENST00000555634 RBMS2Q15434 407 aaKnown RBP9.25□□□□□ -0.93
SHMT2-220ENST00000555634 LTC4SQ16873 150 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 DCAF12L2Q5VW00 463 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 NCR3LG1Q68D85 454 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 TMEM200BQ69YZ2 307 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 C11orf88Q6PI97 169 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 HEPN1Q6WQI6 88 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 LYSMD2Q8IV50 215 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 TEX29Q8N6K0 151 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 OR2AK2Q8NG84 335 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 OR52M1Q8NGK5 317 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 DPAGT1Q9H3H5 408 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 METTL8Q9H825 291 aaKnown RBP9.25□□□□□ -0.93
SHMT2-220ENST00000555634 LPAR2Q9HBW0 351 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 ITGB1BP2Q9UKP3 347 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 AMMECR1Q9Y4X0 333 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-220ENST00000555634 KPTNQ9Y664 436 aa9.25□□□□□ -0.93
SHMT2-220ENST00000555634 TRAV39A0A0B4J263 110 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 FAM240BA0A1B0GVZ2 78 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 NPIPB11E5RHQ5 1161 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 TOR1AO14656 332 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 SCTP09683 121 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 GSTT2P0CG29 244 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 IL3RAP26951 378 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 DVL1P1P54792 670 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-220ENST00000555634 ZNF273Q14593 569 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 CR1LQ2VPA4 569 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 PRAMEF5Q5TYX0 476 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 LPCAT3Q6P1A2 487 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 OR13D1Q8NGV5 346 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 OR1L1Q8NH94 360 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 ZFAND2BQ8WV99 257 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 SDHCQ99643 169 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-220ENST00000555634 KCNS2Q9ULS6 477 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 C14orf166Q9Y224 244 aaKnown RBP9.24□□□□□ -0.93
SHMT2-220ENST00000555634 SESN1Q9Y6P5 492 aa9.24□□□□□ -0.93
SHMT2-220ENST00000555634 TRBV6-7A0A0A0MS04 114 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 MEX3AA1L020 520 aaKnown RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 KIAA1324LA8MWY0 1029 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-220ENST00000555634 C22orf46C9J442 243 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 J3QLI3 93 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 F2RL2O00254 374 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 LANCL1O43813 399 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 SLC22A5O76082 557 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 TOX4O94842 621 aa9.23□□□□□ -0.93
SHMT2-220ENST00000555634 PGAM2P15259 253 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms