RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 KCNIP1Q9NZI2 227 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 PCDHB10Q9UN67 800 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 HBZP02008 142 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 WNT2P09544 360 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 OMGP23515 440 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ERP29P30040 261 aaKnown RBP8.44□□□□□ -1.06
SRP54-208ENST00000555557 FCGR2CP31995 323 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ERVFRD-1P60508 538 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 RPL31P62899 125 aaKnown RBP8.44□□□□□ -1.06
SRP54-208ENST00000555557 HMGN3Q15651 99 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 LTC4SQ16873 150 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 TMEM155Q4W5P6 130 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 PLET1Q6UQ28 207 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ZNF565Q8N9K5 539 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ARL11Q969Q4 196 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ZNF2Q9BSG1 426 aaPredicted RBP8.44□□□□□ -1.06
SRP54-208ENST00000555557 BEX2Q9BXY8 128 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 BEX1Q9HBH7 125 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 OR1A1Q9P1Q5 309 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 SLC23A1Q9UHI7 598 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 SCP2D1Q9UJQ7 156 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 OR5H14A6NHG9 310 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 PHF1O43189 567 aaPredicted RBP8.44□□□□□ -1.06
SRP54-208ENST00000555557 NPY4RP50391 375 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 PDLIM4P50479 330 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ZNF273Q14593 569 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 AADACL3Q5VUY0 350 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 ZNF660Q6AZW8 331 aaPredicted RBP8.44□□□□□ -1.06
SRP54-208ENST00000555557 ARRDC1Q8N5I2 433 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 SPICQ8N5J4 248 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 OR4A4PQ8NGN8 299 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 OR6F1Q8NGZ6 308 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 TERB2Q8NHR7 220 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 LURAP1Q96LR2 239 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 PRRT1Q99946 306 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 MIOXQ9UGB7 285 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 MALRD1Q5VYJ5 2156 aa8.44□□□□□ -1.06
SRP54-208ENST00000555557 IGHV3-43A0A0B4J1X8 118 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 C15orf65H3BRN8 121 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 ARPC1BO15143 372 aaKnown RBP8.43□□□□□ -1.06
SRP54-208ENST00000555557 NDUFB6O95139 128 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 IGHV3-43DP0DP04 118 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 GZMHP20718 246 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 FXYD4P59646 89 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 BAMBIQ13145 260 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 RBMS2Q15434 407 aaKnown RBP8.43□□□□□ -1.06
SRP54-208ENST00000555557 TMEM200BQ69YZ2 307 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 DHRS11Q6UWP2 260 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 BTN2A1Q7KYR7 527 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 OR8B3Q8NGG8 313 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 OR52L2PQ8NGH6 319 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 OR10J5Q8NHC4 309 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 MARCH1Q8TCQ1 289 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 FAM168AQ92567 244 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 CREB3L1Q96BA8 519 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 GALMQ96C23 342 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 NEIL1Q96FI4 390 aaPredicted RBP8.43□□□□□ -1.06
SRP54-208ENST00000555557 OR8B2Q96RD0 313 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 C20orf85Q9H1P6 137 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 PATZ1Q9HBE1 687 aaKnown RBP8.43□□□□□ -1.06
SRP54-208ENST00000555557 SLC2A8Q9NY64 477 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 OR6C3Q9NZP0 311 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 MGAT4AQ9UM21 535 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 MED13LQ71F56 2210 aa8.43□□□□□ -1.06
SRP54-208ENST00000555557 TRGV10A0A0A0MS01 117 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 TRBV6-7A0A0A0MS04 114 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 hADV38S2A0JD32 116 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 POM121CA8CG34 1229 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 INMT-MINDY4F8WBC2 141 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 HSPA12AO43301 675 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 MMP23AO75900 390 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 IGHV3-7P01780 117 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 RLN1P04808 185 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CGB3P0DN86 165 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CGB7P0DN87 165 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CCL3L1P16619 93 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 PI3P19957 117 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 AADACP22760 399 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 IL2RGP31785 369 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CEACAM6P40199 344 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 GNMTQ14749 295 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 C17orf58Q2M2W7 97 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CR1LQ2VPA4 569 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 ZFP69Q49AA0 526 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 UTF1Q5T230 341 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 WDR25Q64LD2 544 aaPredicted RBP8.42□□□□□ -1.06
SRP54-208ENST00000555557 NLRC3Q7RTR2 1065 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 LHFPL1Q86WI0 220 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 TMEM17Q86X19 198 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 FAM185AQ8N0U4 392 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 MARVELD1Q9BSK0 173 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 GSX2Q9BZM3 304 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
SRP54-208ENST00000555557 CALYQ9NYX4 217 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 COPZ2Q9P299 210 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 CLN8Q9UBY8 286 aa8.42□□□□□ -1.06
SRP54-208ENST00000555557 VSIG4Q9Y279 399 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms