RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ACSM3Q53FZ2 586 aa19.46■□□□□ 0.71
PRKCH-216ENST00000555542 C6orf141Q5SZD1 244 aa19.46■□□□□ 0.71
PRKCH-216ENST00000555542 MS4A15Q8N5U1 240 aa19.46■□□□□ 0.71
PRKCH-216ENST00000555542 CST11Q9H112 138 aa19.46■□□□□ 0.71
PRKCH-216ENST00000555542 GNG12Q9UBI6 72 aa19.46■□□□□ 0.71
PRKCH-216ENST00000555542 FAM90A10PA6NDY2 464 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 FAM90A7PA6NKC0 464 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 FAM90A23PA8MXZ1 464 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 VHLP40337 213 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 INSL4Q14641 139 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 SPHARQ15513 63 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 BEAN1Q3B7T3 259 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 RBM48Q5RL73 367 aaKnown RBP19.45■□□□□ 0.7
PRKCH-216ENST00000555542 SAMD5Q5TGI4 173 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 TMEM104Q8NE00 496 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 TSSC4Q9Y5U2 329 aaPredicted RBP19.45■□□□□ 0.7
PRKCH-216ENST00000555542 NOTCH1P46531 2555 aa19.45■□□□□ 0.7
PRKCH-216ENST00000555542 UBE2QL1A1L167 161 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 C12orf77C9JDV5 145 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 FUT3P21217 361 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 AQP4P55087 323 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 ZNF816Q0VGE8 651 aaPredicted RBP19.44■□□□□ 0.7
PRKCH-216ENST00000555542 RNLSQ5VYX0 342 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 TRAT1Q6PIZ9 186 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 Q96M66 194 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 GHRLQ9UBU3 117 aa19.44■□□□□ 0.7
PRKCH-216ENST00000555542 IGHV3-72A0A0B4J1Y9 119 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 IGHV1-3A0A0C4DH29 117 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 H0YHG0 523 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 CA11O75493 328 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 MPIG6BO95866 241 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 PF4P02776 101 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 CD33P20138 364 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 LOXL3P58215 753 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 NKAPLQ5M9Q1 402 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 FAM27D1Q5T7N8 215 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 GLT8D1Q68CQ7 371 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 LINC00311Q8N616 119 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 C5orf56Q8N8D9 126 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 OR10V1Q8NGI7 309 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 KCNIP1Q9NZI2 227 aa19.43■□□□□ 0.7
PRKCH-216ENST00000555542 PSMB11A5LHX3 300 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 HBZP02008 142 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 UBBP0CG47 229 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 TMEM30BQ3MIR4 351 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 OXLD1Q5BKU9 147 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 FAM53AQ6NSI3 398 aaPredicted RBP19.42■□□□□ 0.7
PRKCH-216ENST00000555542 C10orf99Q6UWK7 81 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 CEACAM19Q7Z692 300 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 LYPD6Q86Y78 171 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 C8orf31Q8N9H6 132 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 TPRKBQ9Y3C4 175 aa19.42■□□□□ 0.7
PRKCH-216ENST00000555542 NCBP2LA6PVI3 153 aaKnown RBP19.41■□□□□ 0.7
PRKCH-216ENST00000555542 FGF16O43320 207 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 PDCD6O75340 191 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 RCC1P18754 421 aaPredicted RBP19.41■□□□□ 0.7
PRKCH-216ENST00000555542 HSD17B12Q53GQ0 312 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 TCTEX1D4Q5JR98 221 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 OR1L1Q8NH94 360 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 UFD1Q92890 307 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 NEDD4LQ96PU5 975 aa19.41■□□□□ 0.7
PRKCH-216ENST00000555542 SERPINE3A8MV23 424 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 GLAP06280 429 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 HSMCR30P0CW71 290 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 Q3ZCU0 254 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 UNQ9370/PRO34162Q6UXP9 181 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 OR2T10Q8NGZ9 312 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 NRG4Q8WWG1 115 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 RTN4IP1Q8WWV3 396 aaPredicted RBP19.4■□□□□ 0.7
PRKCH-216ENST00000555542 PHYHIPQ92561 330 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 SGCDQ92629 289 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 TAF9BQ9HBM6 251 aa19.4■□□□□ 0.7
PRKCH-216ENST00000555542 LSM2Q9Y333 95 aaKnown RBP19.4■□□□□ 0.7
PRKCH-216ENST00000555542 SLC31A2O15432 143 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 SC5DO75845 299 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 PRB2P02812 416 aaPredicted RBP19.39■□□□□ 0.69
PRKCH-216ENST00000555542 LIPKQ5VXJ0 399 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 SIGIRRQ6IA17 410 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 SLC35E3Q7Z769 313 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 ZNF329Q86UD4 541 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 LRRTM1Q86UE6 522 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 TGIF2LXQ8IUE1 241 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 IZUMO1Q8IYV9 350 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 CHPT1Q8WUD6 406 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 EAF1Q96JC9 268 aaPredicted RBP19.39■□□□□ 0.69
PRKCH-216ENST00000555542 TMEM59Q9BXS4 323 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 CCDC90BQ9GZT6 254 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 OR2S2Q9NQN1 319 aa19.39■□□□□ 0.69
PRKCH-216ENST00000555542 TXNL1O43396 289 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 SRMP19623 302 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 SLC35A2P78381 396 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 KPRPQ5T749 579 aaPredicted RBP19.38■□□□□ 0.69
PRKCH-216ENST00000555542 OR10K2Q6IF99 312 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 SLC25A48Q6ZT89 311 aaKnown RBP19.38■□□□□ 0.69
PRKCH-216ENST00000555542 FOXRED2Q8IWF2 684 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 GAPTQ8N292 157 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 TMEM203Q969S6 136 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 NOL4LQ96MY1 436 aaPredicted RBP19.38■□□□□ 0.69
PRKCH-216ENST00000555542 VCX3BQ9H321 246 aa19.38■□□□□ 0.69
PRKCH-216ENST00000555542 RGS10O43665 173 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms