RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 IMMP2LQ96T52 175 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 GPR22Q99680 433 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SPAG8Q99932 426 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CDCA4Q9BXL8 241 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CTDSP1Q9GZU7 261 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 GABARAPL1Q9H0R8 117 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TUBB1Q9H4B7 451 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SMDT1Q9H4I9 107 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CALHM2Q9HA72 323 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ELL3Q9HB65 397 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 PLAC1Q9HBJ0 212 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 NAT8BQ9UHF3 227 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 MCTS1Q9ULC4 181 aaKnown RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 PLAGL1Q9UM63 463 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SIGLEC7Q9Y286 467 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ETV7Q9Y603 341 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 NF1P21359 2839 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SPG11Q96JI7 2443 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CENPEQ02224 2701 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 MYOFQ9NZM1 2061 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 LOC100509620A0A075B734 347 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 A0A087WX48 190 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 IGLV5-39A0A0G2JS06 123 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 A0A1B0GU03 582 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ANTXRLA6NF34 631 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM235A6NFC5 223 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 SERINC4A6NH21 518 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 FAM166BA8MTA8 275 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 GABRPO00591 440 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 PIRO00625 290 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ARPC2O15144 300 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TIMM8AO60220 97 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TPST2O60704 377 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 NRASP01111 189 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 CTSDP07339 412 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 SLC25A4P12235 298 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 FCGR2AP12318 317 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 HIST1H1CP16403 213 aaKnown RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ATF1P18846 271 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ALOX5APP20292 161 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 MAOAP21397 527 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 HTR1EP28566 365 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 BTCP35070 178 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 KIR2DS4P43632 304 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 CNN1P51911 297 aaKnown RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 OR12D2P58182 307 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 RPL24P83731 157 aaKnown RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 PDGFRLQ15198 375 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 OR1Q1Q15612 314 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZIC1Q15915 447 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TRMT12Q53H54 448 aaKnown RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM78Q5T7P6 136 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 CPTPQ5TA50 214 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 RTL6Q6ICC9 239 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TRNP1Q6NT89 227 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF730Q6ZMV8 503 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF793Q6ZN11 406 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 GKN2Q86XP6 184 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF683Q8IZ20 524 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM86AQ8N2M4 240 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 KLHDC1Q8N7A1 406 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZFP41Q8N8Y5 198 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 POC1AQ8NBT0 407 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF439Q8NDP4 499 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 NOXO1Q8NFA2 376 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 OR4N2Q8NGD1 307 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 OR4B1Q8NGF8 309 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 OR13C6PQ8NH95 151 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 OCC1Q8TAD7 63 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 MPLKIPQ8TAP9 179 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 CNIH3Q8TBE1 160 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 DOK4Q8TEW6 326 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 Q8WTZ3 238 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 PSMF1Q92530 271 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 DCUN1D4Q92564 292 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 RAB8BQ92930 207 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 APOBEC3DQ96AK3 386 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 APH1AQ96BI3 265 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 FGGYQ96C11 551 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 DNAJC30Q96LL9 226 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF75AQ96N20 296 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TSPAN32Q96QS1 320 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 NKX3-1Q99801 234 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-227ENST00000554491 MICU1Q9BPX6 476 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 GINS3Q9BRX5 216 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 ABHD14AQ9BUJ0 271 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 FAIM2Q9BWQ8 316 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TM2D2Q9BX73 214 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 DUSP16Q9BY84 665 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 NMNAT2Q9BZQ4 307 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 SIRPDQ9H106 197 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 GTSF1LQ9H1H1 148 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 RHOJQ9H4E5 214 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 BANF2Q9H503 90 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 UBTD1Q9HAC8 227 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 NMRAL1Q9HBL8 299 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 PRSS16Q9NQE7 514 aa3.75□□□□□ -1.81
ATXN3-227ENST00000554491 TXNL4BQ9NX01 149 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms