RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 DUS4LO95620 317 aaKnown RBP9.95□□□□□ -0.82
SHMT2-212ENST00000554467 CST4P01036 141 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 OR5H8P0DN80 308 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 PAX1P15863 534 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 HOXC12P31275 282 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 SUPT4H1P63272 117 aaKnown RBP9.95□□□□□ -0.82
SHMT2-212ENST00000554467 RTL6Q6ICC9 239 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 SPNS3Q6ZMD2 512 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 SUCNR1Q9BXA5 334 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 GP6Q9HCN6 339 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 TCAPO15273 167 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 SNRPCP09234 159 aaKnown RBP9.95□□□□□ -0.82
SHMT2-212ENST00000554467 MPZP25189 248 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 RAB32Q13637 225 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 Q6ZS92 163 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 WDR31Q8NA23 367 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 OR10D4PQ8NGN7 298 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 RDH5Q92781 318 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 LURAP1Q96LR2 239 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 C2orf88Q9BSF0 95 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 MED6O75586 246 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 IL2RAP01589 272 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 GRPP07492 148 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 FUT3P21217 361 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 SULT1A1P50225 295 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 DVL1P1P54792 670 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-212ENST00000554467 ANKRD55Q3KP44 614 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 ACTBL2Q562R1 376 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 TMEM128Q5BJH2 165 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 WDR86Q86TI4 376 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 OR5L1Q8NGL2 311 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 OR10C1Q96KK4 312 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 GLRX2Q9NS18 164 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 GFOD1Q9NXC2 390 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 DOK5Q9P104 306 aa9.95□□□□□ -0.82
SHMT2-212ENST00000554467 LSM5Q9Y4Y9 91 aaKnown RBP9.95□□□□□ -0.82
SHMT2-212ENST00000554467 FABP6P51161 128 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 NDUFA6P56556 154 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 PSG7Q13046 419 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 SP6Q3SY56 376 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 C1QL4Q86Z23 238 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 UBALD1Q8TB05 177 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 S100PBPQ96BU1 408 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 SAT2Q96F10 170 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-212ENST00000554467 GPHA2Q96T91 129 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 GAR1Q9NY12 217 aaKnown RBP9.94□□□□□ -0.82
SHMT2-212ENST00000554467 TP53TG5Q9Y2B4 290 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 LRBAP50851 2863 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 MED19A0JLT2 244 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-212ENST00000554467 SLC33A1O00400 549 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-212ENST00000554467 SOD3P08294 240 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 UCP2P55851 309 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 UBAC2Q8NBM4 344 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 TECTBQ96PL2 329 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 HSF4Q9ULV5 492 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 PROCRQ9UNN8 238 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 PKDREJQ9NTG1 2253 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 TFF1P04155 84 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 CECR9P0C854 216 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 FPR2P25090 351 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 KIAA0141Q14154 515 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-212ENST00000554467 PHLDA2Q53GA4 152 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 MKXQ8IYA7 352 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 CISD2Q8N5K1 135 aaKnown RBP9.94□□□□□ -0.82
SHMT2-212ENST00000554467 OR5A2Q8NGI9 324 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 IL36GQ9NZH8 169 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 WASF3Q9UPY6 502 aa9.94□□□□□ -0.82
SHMT2-212ENST00000554467 AHRRA9YTQ3 701 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 CDIPTO14735 213 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 FCGR2CP31995 323 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 MAS1LP35410 378 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 PDZD11Q5EBL8 140 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 RPL7L1Q6DKI1 246 aaKnown RBP9.93□□□□□ -0.82
SHMT2-212ENST00000554467 IGFL3Q6UXB1 125 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 SPACA3Q8IXA5 215 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 KLF14Q8TD94 323 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-212ENST00000554467 MSL2Q9HCI7 577 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 AMDHD2Q9Y303 409 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 M0R036 132 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 FGF12P61328 243 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 GNG3P63215 75 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 OR2A2Q6IF42 318 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF826PQ6ZT77 177 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 ATG101Q9BSB4 218 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 MRPL37Q9BZE1 423 aaKnown RBP9.93□□□□□ -0.82
SHMT2-212ENST00000554467 COL6A6A6NMZ7 2263 aa9.93□□□□□ -0.82
SHMT2-212ENST00000554467 CEBPDP49716 269 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF83P51522 516 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 MRPL49Q13405 166 aaKnown RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 ARL6IP1Q15041 203 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 IAH1Q2TAA2 248 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 OR11L1Q8NGX0 322 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 LYPD6BQ8NI32 183 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 GPR61Q9BZJ8 451 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 SLC5A7Q9GZV3 580 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms