RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CCDC107Q8WV48 283 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 FAM168AQ92567 244 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 NINJ1Q92982 152 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 KIRREL1Q96J84 757 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 DMRTB1Q96MA1 342 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 GINS4Q9BRT9 223 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 PIMREGQ9BSJ6 248 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 GAL3ST2Q9H3Q3 398 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 PATZ1Q9HBE1 687 aaKnown RBP6.34□□□□□ -1.39
TDP1-209ENST00000554180 ING3Q9NXR8 418 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 TAS2R3Q9NYW6 316 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 CLN8Q9UBY8 286 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 CRYBG3Q68DQ2 2970 aa6.34□□□□□ -1.39
TDP1-209ENST00000554180 HECTD1Q9ULT8 2610 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 MALRD1Q5VYJ5 2156 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 IGKV1-6A0A0C4DH72 117 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 KBTBD11-OT1A0A1B0GTJ5 212 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 A0A1W2PPH5 198 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 INMT-MINDY4F8WBC2 141 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 F2RL2O00254 374 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 SDCBPO00560 298 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 BET1O15155 118 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 PRAF2O60831 178 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 PEX14O75381 377 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 FCN3O75636 299 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 DHFRP00374 187 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 PPYP01298 95 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 IGHV2-5P01817 119 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 HEXAP06865 529 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 CGB3P0DN86 165 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 CGB7P0DN87 165 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 SPNP16150 400 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ZBTB25P24278 435 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 DNASE1P24855 282 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 FPR2P25090 351 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 IL2RGP31785 369 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 FCGR2CP31995 323 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 SSTR5P35346 364 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 UCP3P55916 312 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 UBE2MP61081 183 aaKnown RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 HERV-K104P61576 105 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ESCO2Q56NI9 601 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 AADACL3Q5VUY0 350 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 WDR25Q64LD2 544 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 TCF23Q7RTU1 214 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 H1FOOQ8IZA3 346 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 OR52M1Q8NGK5 317 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 C10orf105Q8TEF2 133 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 IL1F10Q8WWZ1 152 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ARL11Q969Q4 196 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 MOB3AQ96BX8 217 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 RAB39BQ96DA2 213 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 MBD6Q96DN6 1003 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ZNF486Q96H40 463 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 ZNF714Q96N38 554 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ZNF2Q9BSG1 426 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 DCTN5Q9BTE1 182 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 SSBP3Q9BWW4 388 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 BPESC1Q9GZL8 116 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ALX4Q9H161 411 aaPredicted RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 MMP28Q9H239 520 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 LIME1Q9H400 295 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 CALYQ9NYX4 217 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 JPT1Q9UK76 154 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 OR2W1Q9Y3N9 320 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 CELSR2Q9HCU4 2923 aa6.33□□□□□ -1.4
TDP1-209ENST00000554180 ANKRD17O75179 2603 aaKnown RBP6.33□□□□□ -1.4
TDP1-209ENST00000554180 APCP25054 2843 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 TRAV39A0A0B4J263 110 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 OR5H14A6NHG9 310 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 A8MXK9 166 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 VWC2LB2RUY7 222 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
TDP1-209ENST00000554180 HSPA12AO43301 675 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 RGS11O94810 467 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 RBP4P02753 201 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 H2AFB2P0C5Z0 115 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 ZNF728P0DKX0 622 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 SLC25A16P16260 332 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 TAS2R31P59538 309 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 GNB2P62879 340 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 C17orf58Q2M2W7 97 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 DEFB113Q30KQ7 82 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 Q3ZCU0 254 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 LY6G6FQ5SQ64 297 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 CD276Q5ZPR3 534 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 LPCAT3Q6P1A2 487 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 FAHD2BQ6P2I3 314 aaPredicted RBP6.32□□□□□ -1.4
TDP1-209ENST00000554180 HEPN1Q6WQI6 88 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 GLCCI1Q86VQ1 547 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 SLC38A6Q8IZM9 456 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 PRR18Q8N4B5 295 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 OR1L1Q8NH94 360 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 ZFAND1Q8TCF1 268 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 EDARADDQ8WWZ3 215 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 H1FXQ92522 213 aaKnown RBP6.32□□□□□ -1.4
TDP1-209ENST00000554180 NRGNQ92686 78 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 MRGPRFQ96AM1 343 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 PERPQ96FX8 193 aa6.32□□□□□ -1.4
TDP1-209ENST00000554180 FAHD2AQ96GK7 314 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms