RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 DCDC5Q6ZRR9 648 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 BIVMQ86UB2 503 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 BATF2Q8N1L9 274 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 BPIFB2Q8N4F0 458 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 ARRDC1Q8N5I2 433 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 DUSP18Q8NEJ0 188 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM185AQ8NFB2 350 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 OR5AP2Q8NGF4 316 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 OR5T2Q8NGG2 359 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 OR4A4PQ8NGN8 299 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 OR6F1Q8NGZ6 308 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 NUDCD2Q8WVJ2 157 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 GALMQ96C23 342 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 RAB39BQ96DA2 213 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 LURAP1Q96LR2 239 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PRRT1Q99946 306 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 SLC25A21Q9BQT8 299 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 WDR13Q9H1Z4 485 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PPA2Q9H2U2 334 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 HRASLSQ9HDD0 168 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 Q9N2K0 584 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 NECAP2Q9NVZ3 263 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 MCUBQ9NWR8 336 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 ANAPC10Q9UM13 185 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 KCNK7Q9Y2U2 307 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 ROS1P08922 2347 aa4.17□□□□□ -1.74
VTI1B-202ENST00000553619 RAI1Q7Z5J4 1906 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-202ENST00000553619 PKDREJQ9NTG1 2253 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 KIAA2026Q5HYC2 2103 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 IGKV1D-17A0A075B6S4 117 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 IGHV3OR15-7A0A075B7D8 119 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 MEIKINA0A087WXM9 373 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TRGV10A0A0A0MS01 117 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 hCG_1809904A0A1W2PP81 198 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 A0A1W2PPE2 198 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 A0A1W2PR64 198 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 A0A1W2PRV1 198 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 hADV38S2A0JD32 116 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 MEIS3P1A6NDR6 274 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 HSPB6O14558 160 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TNFRSF13BO14836 293 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 PLA2G10O15496 165 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 HOXA3O43365 443 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 LANCL1O43813 399 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 SSX5O60225 188 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 SLC22A5O76082 557 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 RGS11O94810 467 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 LY86O95711 162 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 NAPSAO96009 420 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CD3DP04234 171 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 S100A6P06703 90 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 FCGR3AP08637 254 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 RNF224P0DH78 156 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 PTHLHP12272 177 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 PAX1P15863 534 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 NDUFB7P17568 137 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 EGR1P18146 543 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 GIFP27352 417 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 HLA-DMAP28067 261 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 S100GP29377 79 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 IL2RGP31785 369 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ATP5J2P56134 94 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 EDDM3BP56851 147 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 SEC61A1P61619 476 aaKnown RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 IFITM3Q01628 133 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 AESQ08117 197 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 KLF9Q13886 244 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 RBMS2Q15434 407 aaKnown RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CARTPTQ16568 116 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM30BQ3MIR4 351 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 VAX1Q5SQQ9 334 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 OLFML2AQ68BL7 652 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 STUMQ69YW2 141 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF880Q6PDB4 577 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 DHRS11Q6UWP2 260 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF497Q6ZNH5 498 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 C17orf107Q6ZR85 190 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 LRRC75A-AS1Q8N1F1 130 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 GAPTQ8N292 157 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CD177Q8N6Q3 437 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 GVQW1Q8N7I0 195 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 OR4S1Q8NGB4 309 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 OR10A7Q8NGE5 316 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 OR8B3Q8NGG8 313 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TERB2Q8NHR7 220 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ZFAND1Q8TCF1 268 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 FAM216AQ8WUB2 273 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CHPT1Q8WUD6 406 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CCDC107Q8WV48 283 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CORO2AQ92828 525 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TRIM63Q969Q1 353 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 OR8B2Q96RD0 313 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CCL13Q99616 98 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM246Q9BRR3 403 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 PIMREGQ9BSJ6 248 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 SHARPINQ9H0F6 387 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 C11orf54Q9H0W9 315 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 PATZ1Q9HBE1 687 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms