RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 HOXB6P17509 224 aaKnown RBP11.66□□□□□ -0.54
CACNB3-220ENST00000551716 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-220ENST00000551716 CRISP1P54107 249 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 LSAMPQ13449 338 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 ECSCRQ19T08 205 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 C19orf54Q5BKX5 351 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 GID4Q8IVV7 300 aa11.66□□□□□ -0.54
CACNB3-220ENST00000551716 UTP4Q969X6 686 aaKnown RBP11.66□□□□□ -0.54
CACNB3-220ENST00000551716 ELAC2Q9BQ52 826 aaKnown RBP11.66□□□□□ -0.54
CACNB3-220ENST00000551716 THAP7Q9BT49 309 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-220ENST00000551716 DPCDQ9BVM2 203 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-220ENST00000551716 TRAV39A0A0B4J263 110 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 A0A1W2PQL4 384 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-220ENST00000551716 CXorf65A6NEN9 183 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 SOX15O60248 233 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 TPPPO94811 219 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 FAM107AO95990 144 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 FSTP19883 344 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 KISS1Q15726 138 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 MOGAT2Q3SYC2 334 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 AADACL4Q5VUY2 407 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 CD200R1LQ6Q8B3 271 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 SSX6Q7RTT6 188 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 PXT1Q8NFP0 134 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 NPBQ8NG41 125 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 OR9G4Q8NGQ1 327 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 OR13C9Q8NGT0 318 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 RGP1Q92546 391 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-220ENST00000551716 CPNE2Q96FN4 548 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-220ENST00000551716 TBX5Q99593 518 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 SIGLEC8Q9NYZ4 499 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
CACNB3-220ENST00000551716 KLF5Q13887 457 aaPredicted RBP11.64□□□□□ -0.55
CACNB3-220ENST00000551716 PTGES3Q15185 160 aaKnown RBP11.64□□□□□ -0.55
CACNB3-220ENST00000551716 AKIRIN2Q53H80 203 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 ACTBL2Q562R1 376 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 BCDIN3DQ7Z5W3 292 aaKnown RBP11.64□□□□□ -0.55
CACNB3-220ENST00000551716 TMEM179BQ7Z7N9 219 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 ARHGAP24Q8N264 748 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 SUMF2Q8NBJ7 301 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 NABP2Q9BQ15 211 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 GNG12Q9UBI6 72 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 WARS2Q9UGM6 360 aaKnown RBP11.64□□□□□ -0.55
CACNB3-220ENST00000551716 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
CACNB3-220ENST00000551716 NUBP2Q9Y5Y2 271 aa11.64□□□□□ -0.55
CACNB3-220ENST00000551716 SPINT2O43291 252 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 BRI3O95415 125 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 RPSAP08865 295 aaKnown RBP11.63□□□□□ -0.55
CACNB3-220ENST00000551716 PRKACGP22612 351 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 TPPP2P59282 170 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 EFNB1P98172 346 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
CACNB3-220ENST00000551716 CT45A1Q5HYN5 189 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 KCTD20Q7Z5Y7 419 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 LAX1Q8IWV1 398 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 RPP25LQ8N5L8 163 aaKnown RBP11.63□□□□□ -0.55
CACNB3-220ENST00000551716 TCEANCQ8N8B7 351 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 ZNF439Q8NDP4 499 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 OR10H4Q8NGA5 316 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 OR5D14Q8NGL3 314 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 OR13C3Q8NGS6 347 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 OR2K2Q8NGT1 345 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 OR2G2Q8NGZ5 317 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 CT45A3Q8NHU0 189 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 TMEM163Q8TC26 289 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 CASTOR1Q8WTX7 329 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 IFT22Q9H7X7 185 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 SLC2A8Q9NY64 477 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 CNOT2Q9NZN8 540 aaKnown RBP11.63□□□□□ -0.55
CACNB3-220ENST00000551716 TAGLN3Q9UI15 199 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 GNG8Q9UK08 70 aa11.63□□□□□ -0.55
CACNB3-220ENST00000551716 KMT2AQ03164 3969 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 IGHV3-43A0A0B4J1X8 118 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 IGHV3-43DP0DP04 118 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 ATP6V1E1P36543 226 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 ZNF134P52741 427 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 CX3CL1P78423 397 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 RSU1Q15404 277 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 ZNF691Q5VV52 312 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
CACNB3-220ENST00000551716 IL34Q6ZMJ4 242 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 SERPINA12Q8IW75 414 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 RITA1Q96K30 269 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 MS4A10Q96PG2 267 aa11.62□□□□□ -0.55
CACNB3-220ENST00000551716 A0A0G2JLM5 398 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 C13orf42A0A1B0GVH6 325 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 SLC31A2O15432 143 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 NDUFA3O95167 84 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 TFAP2AP05549 437 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 CD81P60033 236 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 LRRC36Q1X8D7 754 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 FDX2Q6P4F2 183 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 PPP1R27Q86WC6 154 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 STX19Q8N4C7 294 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 ABHD5Q8WTS1 349 aa11.61□□□□□ -0.55
CACNB3-220ENST00000551716 CCDC107Q8WV48 283 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms